| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2328 |
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| Symbol | |
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| ID | 4004661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 2334491 |
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| End bp | 2337496 |
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| Gene Length | 3006 bp |
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| Protein Length | 1001 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637947310 |
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| Product | putative ATP-dependent DNA ligase |
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| Protein accession | YP_558694 |
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| Protein GI | 91783488 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase
[COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02776] DNA ligase D
[TIGR02777] DNA ligase D, 3'-phosphoesterase domain
[TIGR02778] DNA polymerase LigD, polymerase domain
[TIGR02779] DNA polymerase LigD, ligase domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0455665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.455767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA GACTCGACAC CTACAACCGC AAACGCCGCT TCGACGACAC GCCGGAACCT
GCGGGCACGC GCACGAGTCG CAAGCAGGGC GGCCGGAAGA CGGCCGGGCA GGCGTCCCCG
GAGGCGCTGT CGTACGTGAT TCAGGAGCAC GACGCGCGTC GTTTGCACTA CGACTTCCGG
CTCGAACTGA ACGGCACGCT CCTGTCCTGG GCGGTGCCGA AAGGGCCGAG CCTCGACCCG
TCAGTAAAGC GGCTGGCGGT GCATGTCGAA GACCATCCGG TCGAATACGG TTCGTTCGAA
GGCGAAATTC CGCTGGGCAA TTACGGCGCG GGCAGTGTGA TCGTGTGGGA TCGCGGCACA
TGGGAGCCGC TCGGCGGCGC GGCCGAGGCG GCGCGCGCTT ACGCGGCCGG CAAGCTCAAG
TTCCAGTTGC ACGGCGAGAA GCTGCACGGC GGCTGGACGC TGGTGCGCAG CCATATGCGC
GGCAGCGGCG ACAAGGAACA GTGGCTGCTC ATCAAGGAAC GCGACGACGA AGCGCGCGAC
GAAAGCAAGT ACGACATTCT GAAGAAGCGT CCGGGCAGCG TGCTCGCCGA TAGCGCTGCG
GCAGTCAAAG GCGCAAAAAC TGCAAAGACG GCGGCCGCGA AGAGCACAGC AAAAACTGCA
AGCAAAGCGG CCGTGGCCAC GGCCACGAAA GCCACTGCGG ATCCTGACTC GGCGTCGCTC
GCAAAACGAA CCGGCAGGAA CGGCGCGCAG AAAGCTTCAT CCAGCCGCGC GGACCCGAAG
CGACCCGACA TCGTCGCCAC GCGCAGCGCG CAATCGCTGC GCGACCTCGC CGCTTCGCCG
TCGATCGAGG GCGCGGTGCC GGCACGCTTG CCCGCGACCT TCAAGCCGCA ACTGGCGACG
CTCGTCGACG GCGCGCCTCC CGGCAATGAA TGGTCGTACG AAATCAAGTT CGACGGCTAT
CGTGTGCTGG TCCGAATCGA TAGGGCGACC AAGGGAAGCG CGGTCAAGGT GCTCACCCGC
GCCGGCAACG ACTGGACCGC GAAGTTCAGC AAACAGGTCA AGGCGTTCGA ACAACTCGAC
ATCGAAAGTG CATGGCTCGA CGGCGAGGCC GTCGTGCTGA ACCAGAACGG CGTGCCGAAT
TTTCAGGCGC TGCAAAACGC GTTCGATTCG AACCGCCCGC AAGACATTGT GATTTACCTG
TTCGACATAC CGTTTCTGAA CGGCTACGAC TTGCGCGGCG TGCCGCTCGA ACAACGCCGC
GCGATTCTGC GCGCGTTGCT CGAAGACGCC GACGACAGCG TGCTGCGCTT CTCGAACAAT
TTCGAGTTCA GCGCGGATGA CCTCCTCAGG AGCGCGTGCG ACATGGCGCT GGAAGGCATC
ATCGGCAAGC GGCGCGACAG CGGCTATATG TCGGGACGTT CGTCGGCGTG GATCAAACTG
AAGTGCCGCC GACGCCAGGA GTTCGTGATA GGCGGCTACT CGGAACCGTC CGGCAGCCGC
GCGGCGTTCG GTGCGCTGCT GCTCGGCGTC TATGACGGCA ACGGCAAGTT GCAGTATGCA
GGGCGCGTGG GCACCGGTTT CGACGCGGCG CTGCTGCGCT CGGTGAAGAA AGAACTCGAT
GCGCACGAGA CCCGGCACAT GCCGTTCGCC GCCGCGCCGC GCGAACGCAG CCGCACGCCG
GTGCATTGGG TCGAACCGGT GCTGGTCGCC GAATGCAATT TCGCGGAATG GACGAGCGAC
GGCATCGTGC GGCAGGCGTC GTTCGTGAGT CTGCGCAGCG ACAAGCCGGC GCGCCAGATC
GTCAAGGAAA CACCTCGACA GGGAGCCGAC GTGCAACAGC AAACCGATTC TGTGTCTAAC
GACGCGCCGA CCAAACGTGC CGCGCGCAAG ACTTCCGCCA GTGCGGCGAC AACGTCCGGC
GAGGGGAAAA CTCGCGTGGC GAAATCGAAG ACTGCGGATG CGAAAGACGC CAGTACAAAG
AGCCGTGGAG TAGAGGCAAG CGGTGCGAAA GGCAGCGCTG CGAAAGCCGC TGCAACCAAA
CCAACGGCAG CGACAGCCAA AGCAGCGAAA GCGACGAAAA CCTCAGCCGC AAAAGCAAAC
ACCACCTCAG CCCCCGGCGA AGTCGCCGGC GTCCGCGTCT CCCATCCCGA CCGCGTCATC
GACAGGAGCA CGGGCACGCG CAAGATCGAT CTCGTGCGGT ACTACGAATC GGTGGCCGAC
TGGATGCTGC CGCATCTGCG GGACCGCCCG GTTTCGCTGG TGCGCGCCCC CGAGGACATC
GACGGCGAGC TGTTTTTCCA GAAGCACAGC CAGAAGCTGT CGATTCCGAA TGTCACCCAG
CATCCGGGGC TCGATCCGGG GCATCCGCCG CTGATTACCG TCGATACGCT CAAGGCGCTG
GTCGGCGCCG CGCAAATGGG CACCGTCGAA TTTCACACGT GGAATGCCGT TGTGTCGAAC
ATCGAAAAGC CGGACCGCAT GGTGTTCGAC CTCGACCCGG ATGCCTCGCT GGGTTGGGAG
CGCATGATCG AAGCCGCGCA ATTGACGCGT TCGCTGCTCG AAGAACTCGG TCTCGCGTCG
TTCTGCAAGA CGAGCGGCGG CAAGGGATTT CACGTGGTCG TGCCGCTCGC GAAGCAGGCC
GGCTGGGACG AAGTGAAGGA CTTTTCTCAA GCCGTCGCGC AGCACATGGC GGCGACGCTG
CCCAGGTACT TCAGCGCGAA GATGGGCGCG CAGAATCGCA AGCAGAAAAT TTTCGTCGAC
TACCTGCGCA ACAACCGCGG ATCGAGCACG GTCGCCGCAT TTTCCGCGCG CGCGCGGCCG
GGCCTGGGCG TATCGGTGCC GCTGGCCTGG GACGAAGTCG CCACCACGAC GGGCGGCGCT
CAGTGGACCA TCGAGAATCT GCACGAACGC CTCGCCGACC TGAAAAGCGA CCCGTGGGCG
GACTATGCGA AAACGCGCCA GCGCATTACC GCTGCCATGA AAAAACGCCT GGACGACGCG
CAGTAA
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| Protein sequence | MNDRLDTYNR KRRFDDTPEP AGTRTSRKQG GRKTAGQASP EALSYVIQEH DARRLHYDFR
LELNGTLLSW AVPKGPSLDP SVKRLAVHVE DHPVEYGSFE GEIPLGNYGA GSVIVWDRGT
WEPLGGAAEA ARAYAAGKLK FQLHGEKLHG GWTLVRSHMR GSGDKEQWLL IKERDDEARD
ESKYDILKKR PGSVLADSAA AVKGAKTAKT AAAKSTAKTA SKAAVATATK ATADPDSASL
AKRTGRNGAQ KASSSRADPK RPDIVATRSA QSLRDLAASP SIEGAVPARL PATFKPQLAT
LVDGAPPGNE WSYEIKFDGY RVLVRIDRAT KGSAVKVLTR AGNDWTAKFS KQVKAFEQLD
IESAWLDGEA VVLNQNGVPN FQALQNAFDS NRPQDIVIYL FDIPFLNGYD LRGVPLEQRR
AILRALLEDA DDSVLRFSNN FEFSADDLLR SACDMALEGI IGKRRDSGYM SGRSSAWIKL
KCRRRQEFVI GGYSEPSGSR AAFGALLLGV YDGNGKLQYA GRVGTGFDAA LLRSVKKELD
AHETRHMPFA AAPRERSRTP VHWVEPVLVA ECNFAEWTSD GIVRQASFVS LRSDKPARQI
VKETPRQGAD VQQQTDSVSN DAPTKRAARK TSASAATTSG EGKTRVAKSK TADAKDASTK
SRGVEASGAK GSAAKAAATK PTAATAKAAK ATKTSAAKAN TTSAPGEVAG VRVSHPDRVI
DRSTGTRKID LVRYYESVAD WMLPHLRDRP VSLVRAPEDI DGELFFQKHS QKLSIPNVTQ
HPGLDPGHPP LITVDTLKAL VGAAQMGTVE FHTWNAVVSN IEKPDRMVFD LDPDASLGWE
RMIEAAQLTR SLLEELGLAS FCKTSGGKGF HVVVPLAKQA GWDEVKDFSQ AVAQHMAATL
PRYFSAKMGA QNRKQKIFVD YLRNNRGSST VAAFSARARP GLGVSVPLAW DEVATTTGGA
QWTIENLHER LADLKSDPWA DYAKTRQRIT AAMKKRLDDA Q
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