Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1946 |
Symbol | |
ID | 4002819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 2783097 |
End bp | 2783753 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637947690 |
Product | OmpW family outer membrane porin |
Protein accession | YP_559071 |
Protein GI | 91783865 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000112582 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.916389 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACT CGTTGAGGAA CCGATTCAAA GCCGCCGCCA TCGTTTCGAG CCTGCTGTGC GCGGGCGCTT TTGCCTCGCA GGCGCATGCC GAGGGCGATG ATACGATGAA CGGCATTCAT GCCGGCGACG TGCTGGTGCG GCTGCGCGCC ATCAGCATCA TGCCGAACGT GAGCACCACC CAATCGCTGT CGGCGCTCAA CGTGGACGTG AACAACGCGA TCATGCCGGA ACTGGATCTG ACCTATATGA TCCGCGATTA CCTCGGCGTC GAACTGATTC TCGCCACCTC GCGGCATCAG CTGACCTCGA GCCTCGGCAA TCTCGGTGGC GTGAACGTGC TGCCGCCTAC GCTGTTGCTG CAATATCACT TCAACCATGC GGGACGCATT CGTCCGTATC TGGGCGCCGG TCTCAACTAC ACGCTGTTTT ACAACAACGG CCTGAACGCG GGCGGCCAGT CGATCGGGAT TACCAACCAT AGCTGGGGCC CGGCGCTGCA GGCCGGTGTC GACGTTCAGG TGACCAAGAC GTTGTTCGTC AACGCGGACA TCAAGAAAAT CTGGATGCAT ACGGATGCCA CGCTCGGCGG CCAGCCGCTG GGTCGCCTGA GCATCGATCC GGTGGTGGTC GGCCTGGGTG TCGGGATGCG CTTCTGA
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Protein sequence | MKHSLRNRFK AAAIVSSLLC AGAFASQAHA EGDDTMNGIH AGDVLVRLRA ISIMPNVSTT QSLSALNVDV NNAIMPELDL TYMIRDYLGV ELILATSRHQ LTSSLGNLGG VNVLPPTLLL QYHFNHAGRI RPYLGAGLNY TLFYNNGLNA GGQSIGITNH SWGPALQAGV DVQVTKTLFV NADIKKIWMH TDATLGGQPL GRLSIDPVVV GLGVGMRF
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