| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1921 |
|---|
| Symbol | ldcA |
|---|
| ID | 4004840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 2807957 |
|---|
| End bp | 2808883 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637947715 |
|---|
| Product | L,D-carboxypeptidase A |
|---|
| Protein accession | YP_559096 |
|---|
| Protein GI | 91783890 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.271346 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTCC ATCGCACCAT CGAACTGATC GCTCCGTCCG GGTATCCGCA TGATCCGGAG
GTGCTGCATC GCGCGCTGCA ACGTTTGCAT GCGCAGGGAC ATCGTGTCGA GGGCGCGGAG
GCGGCGAAGC GCCGCTACCA GCGTTTCGCG GGCACGGACG GCCAGCGCGC CGCCGATCTG
AACCGGCTCG CCGACCCGTC GCGCGAGTTG CCGGACATCG TGCTGGCCGT GCGCGGCGGC
TACGGCGCGG TGCGCATTCT GCACGGGCTC GACTACGAAG GGCTGCAACG GCGGTTGACC
GATCAGCCGG TCGCTCTGGT GGGGCACAGC GATTTCACCG CGATCCAGCT TGCGTTGCTG
GCGCGCGCCG GCGTGAAGAC CTTCGGCGGC CCGATGGTGA TGAGCGACTT CGGCGCTGAG
GAACTCAGCG AATTCACCAT GCAGCACTTC TGGTCCGCGT TGACAAAGCC GACCATGACG
GTTTCGAGCA ACACGCCGCA GGCGCAGCCG GTGGACGTCT CGGGCATGTT GTGGGGGGGT
AACCTGGCGG TGCTGGTCTC GCTGATCGGC ACGCCGTATA TGCCGCCGGT GAAGGGCGGC
ATCCTGTTCA TCGAGGACGT CAACGAACAG CCGTTCCGGG TCGAGCGGAT GATTTATCAA
CTGCACCTGT CCGGCATCCT CGCGCAGCAA CAGGCGCTCG TGCTGGGCGA CTTCTCCGGC
GCCAAAGCGT ACGACTACGA CAACGGCTAC GATCTGCATG CAGTGATCGA GCAGGCGAGG
TCGGTGATCG GCATTCCGAT CGTCACCGGC CTGCAATTCG GGCATGTTCG CAACATGCTG
ACGCTGCCGG TTGGCGCGAA CGCGCATCTG GTTGCCGACG CACACGGATT CAGACTGAGC
TTGTCGGACT ATCCATACCT CGCCTGA
|
|---|
| Protein sequence | MAVHRTIELI APSGYPHDPE VLHRALQRLH AQGHRVEGAE AAKRRYQRFA GTDGQRAADL
NRLADPSREL PDIVLAVRGG YGAVRILHGL DYEGLQRRLT DQPVALVGHS DFTAIQLALL
ARAGVKTFGG PMVMSDFGAE ELSEFTMQHF WSALTKPTMT VSSNTPQAQP VDVSGMLWGG
NLAVLVSLIG TPYMPPVKGG ILFIEDVNEQ PFRVERMIYQ LHLSGILAQQ QALVLGDFSG
AKAYDYDNGY DLHAVIEQAR SVIGIPIVTG LQFGHVRNML TLPVGANAHL VADAHGFRLS
LSDYPYLA
|
|---|
| |