| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1913 |
|---|
| Symbol | |
|---|
| ID | 4004848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 2813864 |
|---|
| End bp | 2814808 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637947723 |
|---|
| Product | ABC multidrug efflux pump, ATPase subunit |
|---|
| Protein accession | YP_559104 |
|---|
| Protein GI | 91783898 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.173813 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.389183 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG CCGCGGCCGT GACCGCGATC CATGTACGCG ACCTGGTCCG CAGTTTCGGG
GCCGTGCAGG CGGTGCGCGG TGTCAGCCTC GATATCGAGC GCGGAGAAAT CTTCGGCCTG
GTCGGCCCCG ACGGCGCGGG CAAGACCACC ATCATGCGCA TGCTGGCGGG CGTGCTGCGA
CCGGACGCCG GCGAGATCTC GCTGGAAAAT ATCGACGTGA TAGCGAAGCC GGAACTCGCG
AAAGCGGCGC TCAGCTATAT GCCCCAGCGT TTCGGCCTGT ACGAAGATCT GACGGTCGCC
GAGAACATTT TTTTCTACGG CGAACTGTTC GGGGTGTCGC GCAAAACCAA TCGAACCCGC
AGCGGCGAAC TTCTCGAGGC CGCCGGGCTC GTGCCGTTCC GGGATCGTCT CGCCGGGCAG
TTGTCGGGCG GCATGAAGCA GAAACTCGGC CTGGTTTGCG CATTGATTCA CACCCCGCGC
GTGCTGCTGC TGGATGAGCC GACTACCGGC GTGGACCCGG TGTCGCGGCG CGATTTCTGG
GCGATTCTGT ACAACCTGCG CGAAAGCGGC GTCACCATCG TGCTGTCCAC CGCTTATATG
GACGAAGCCG AACGCTGCTC GCGGCTCGCG CTGCTGCATA CCGGGCAAAT CCGCCAGTGC
GATACGCCGT CACGGCTGAA GCAGACCATG CCGGGAGCCC TGTTCGCAGT CGTCGCGGCA
GACCCGCGCG CGGTACACGA CGCACTCGTG GATGCGCCCG GCGTGCTCAG CGCATTACTG
ATGGGCGACC GTGTGCACGT GCGCGTCGAC GACGCGGCGC GCCGTCTGCC GGAGTTGCAG
GCACGGCTTG CCGCGCGCTC CATTGCGAAC GCAACCGTGA GTTCCATCGA GCCGGGCATC
GAAGATGTTT TCGTCGCGCT CGTCGGGTCG GGAAGCGCAA CATGA
|
|---|
| Protein sequence | MSTAAAVTAI HVRDLVRSFG AVQAVRGVSL DIERGEIFGL VGPDGAGKTT IMRMLAGVLR
PDAGEISLEN IDVIAKPELA KAALSYMPQR FGLYEDLTVA ENIFFYGELF GVSRKTNRTR
SGELLEAAGL VPFRDRLAGQ LSGGMKQKLG LVCALIHTPR VLLLDEPTTG VDPVSRRDFW
AILYNLRESG VTIVLSTAYM DEAERCSRLA LLHTGQIRQC DTPSRLKQTM PGALFAVVAA
DPRAVHDALV DAPGVLSALL MGDRVHVRVD DAARRLPELQ ARLAARSIAN ATVSSIEPGI
EDVFVALVGS GSAT
|
|---|
| |