| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1888 |
|---|
| Symbol | |
|---|
| ID | 4003492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 2835885 |
|---|
| End bp | 2836439 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637947748 |
|---|
| Product | putative universal stress protein |
|---|
| Protein accession | YP_559129 |
|---|
| Protein GI | 91783923 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.803254 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.974311 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCAGC TAATCTGCCG CGATGAGCAG TATCAGGACG TCGGGCGGGG TGTCCGCAAC
GTCTGCGAGG AGCGGATCAT GTATCAGAAG ATCGTCGTGG CGCTGGATGG CAGCGAGTCG
TCCCGATGGG CGCTGTATGA AGCGCTGCAA TTTGCGCAGC TCACGCAAGC GCGGCTGCAT
GCGGTGTATG TCGTCCATCC GTGGTGTGCG TCCCGTTACG CGGGCTATTT CAATCCCGAC
CAGCTTCGTG ACGTGCTGCG TGAAGACGGC CGGCTCGCCC TCGATGAGGC GCGCCGGGCG
ATGGCCGAGC GTGGCGTGCC CGGCGATACC GAGATCGAGG AAACGGAGAG TGCGGCGGAC
GATATCCCGC ACTGTCTCGC CCGTTGCGTG CAGCGCCAGG GCGCGGGTCT GGTGGTGATG
GGCACGCAAG GCCGGCATGG CATAGGGCGG CTGCTACAGG GCAGCGTCGC GGAAACGTTC
CTGCGGGGCG CGCACGTTCC GGTGCTGCTG GTCAGGTGCC CACGCGATCA GGACGAGATA
CCGGAAGGGC TGTAA
|
|---|
| Protein sequence | MIQLICRDEQ YQDVGRGVRN VCEERIMYQK IVVALDGSES SRWALYEALQ FAQLTQARLH
AVYVVHPWCA SRYAGYFNPD QLRDVLREDG RLALDEARRA MAERGVPGDT EIEETESAAD
DIPHCLARCV QRQGAGLVVM GTQGRHGIGR LLQGSVAETF LRGAHVPVLL VRCPRDQDEI
PEGL
|
|---|
| |