Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1761 |
Symbol | |
ID | 4004823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 2965845 |
End bp | 2967074 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637947867 |
Product | putative type IV secretion system protein VirB10 |
Protein accession | YP_559248 |
Protein GI | 91784042 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.359566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.289006 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGACG ATACTGAACG CAACGTGATC GAGCCCGACG ACTCCGCGGG CCAGCAGCCA GCGCGCAACC CGAATGGCGG TGCTGTGCCG ATGTCTGCCG ATCGCGGCAT GCCAGCGCTG GGCCAGTACC GTAGCACCCG TCCGCGGGCC TGGTGGCTGA CGCCAATCGC AATCGTACTG GTCGTCGGCG CCGGTGCAGT CTGGACCGTG CATGGCTTCC TCGCCCGCCA CGATGCTGAG GCGAAGGCGC GGCGTGACTC GGTGGCCGAC ACGTCCACGC AAGGCCGCAC TTTCAAGGAT GCTCCCGCAT CCGCGGTCAT CGCTGCATCG GTACCGGTGC CCGCAAGTGC CGTTGTCGTT CGTCCTGTGC CGGCTTCGGG TGTGGCTGCC GCCCCGGTTA GCACCCCGCA TACGGCGGCA CCCCGTAGCT ATTACGACGC GCCCCTGCTG GCCACGGGAG GCGGGCAAGA GGCTGTGGCC GGACTGCCTG GCGTGCTCGA GGCCGGCAGC GTGGCAGGTG CCGCTTCGTC GGTCGCGGCA GCCGTGACCG GTGGCGCCGG GGCTCCGGTT GTGGGGCAGG CGGGCGGCGC GCTCGCCCAG GCACTGACGC CGACAGCGAC GCCGCGCGTG CGCGCCGCCA TGCTCGGCAA TCGCAGCCTC ACCCTCGCGC AGGGCGCCAA GATCGACTGC GTGGGCGACA CCGCGTTCGA TTCGACCGAG GCCGGAATTT CGACCTGCAC GGTCACGAAG AACGTGTACT CGGACGACGG GAACGTGCTG CTGATCGAGC GTGGTTCGCA GATCAACAGC GAGTACCGCT CGAACCTGGC GCCAGGGCAG AAGCGCGTCT TCGTCCTGTC GGCCCGCATC AAGACCCCGA ATGGCATCAC GGTCGAGATC GACTCGCCGG CGGCCGATGC GCTCGGCCGG ATGGGCGTCG ATGGCTACGT GAACAACCAC TGGGGCCAGC GCATTGGTGC GGCGATGCTG CTCGGTATCA CGCAGGACGC GATCGGCTAT CTGGCCACGC GCGGCGGCAA CAGCAACGGG TCGGTGGTGT TCGAGAACAC GCAGCAGCAG GGCAACGACA TGGCCACGCG CGTGCTCGAC AGCACTATCA ATATCCCGCC GACCCTGGCG CAGAACCAGG GCGCAGAATT TACGATCGTC GTTGCACGCG ATCTCGATTT CGGATCGGTC TATGCCCTGA AGCCGGAGGG CACGCAATGA
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Protein sequence | MNDDTERNVI EPDDSAGQQP ARNPNGGAVP MSADRGMPAL GQYRSTRPRA WWLTPIAIVL VVGAGAVWTV HGFLARHDAE AKARRDSVAD TSTQGRTFKD APASAVIAAS VPVPASAVVV RPVPASGVAA APVSTPHTAA PRSYYDAPLL ATGGGQEAVA GLPGVLEAGS VAGAASSVAA AVTGGAGAPV VGQAGGALAQ ALTPTATPRV RAAMLGNRSL TLAQGAKIDC VGDTAFDSTE AGISTCTVTK NVYSDDGNVL LIERGSQINS EYRSNLAPGQ KRVFVLSARI KTPNGITVEI DSPAADALGR MGVDGYVNNH WGQRIGAAML LGITQDAIGY LATRGGNSNG SVVFENTQQQ GNDMATRVLD STINIPPTLA QNQGAEFTIV VARDLDFGSV YALKPEGTQ
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