Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1717 |
Symbol | |
ID | 4004193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 3010022 |
End bp | 3011080 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637947910 |
Product | OmpC family outer membrane porin |
Protein accession | YP_559291 |
Protein GI | 91784085 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.339565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAG GTCCGCTTGC GGCAATCCTG CTTTCCTCGG TATTCAATCT TGCGCACGCA CAGTCAAGTG TGAGCCTCTA CGGTATTGTT GGCGGAGGCG TCAGATGGGT TAATGGAACG AAGGGAGGCT CGACAGTCGA ATACTCCAAC ATCATCGCGC CGAACCGGTT CGGCCTGACC GGCTCCGAAG ACATCGGTGC GGGAGTGAAG GTCATTTTCC GTCTGGAAAA CGGCTTCAAC TCCTCAAATG GCACCTTGGC CACAAATAAC GTCCTTTGGT CCCGTCAAGC ATATGTCGGA TTGGATGGGA TATATGGACG TCTGACGATG GGACGCCAGT TCAGTTCCTT TGAGGATTTG GGTATTTCTC TGGATCCGTC ACTGATTGGC GGCGCAGATC CGGCGATCAC TCCGGGCGGT CTTCTCGGTG TGAACTTTTT CACTTTGGAT AGCCGCTTCA ACAACTCCGT GAAGTATACA AACGGCTTCG CCGGAGCAAA GCTTAGTGCA AGCTATTCAT TCGGCGGTGT CGCCGGGAAC CAGCGCGCAG GATCCAACTA TTCGGCGGCC GCCAGCTACG ATACGGGACC GCTAAGAGGC GGTATTGCAT ATCAACGCAC CTACAATGCG GATGCAAGCC AGATCGCACA GAACTATTAT GCCGGCGGCG TGTGGCAAAT TGGACCCGTT CGCGCCTATC TCAGCTATCT GGTATTAACC GTGAGCGGAT CGACGAAAGC TCCTTCCCAG CGACGTGATG ATGTGCCGCA GGGCGGCGTG GTCTGGCAAA TTACGCCGGC ATTTGCGGTG ACTGCCGCCT ACTACGATGA CATCGCCAGT AACCTGGGCA ATGTTAAAGG CGCCAGTGGT CACAAGCAGA CTGCGTATGT GATAGGTGAA TATTTTCTTT CCAAGCGAAC CGAGATCTAC GTGGAAGCCG ACCGAAATCA TTTTTCCGGC GCCTACAGGA AGGATCCGAC GAATATCGCG GTTCTCAACC GCAGCCCCGG GAGTTCCGGT ATTACCGGCA TATCGGTCGG GCTACAAACA AAATTCTAG
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Protein sequence | MNKGPLAAIL LSSVFNLAHA QSSVSLYGIV GGGVRWVNGT KGGSTVEYSN IIAPNRFGLT GSEDIGAGVK VIFRLENGFN SSNGTLATNN VLWSRQAYVG LDGIYGRLTM GRQFSSFEDL GISLDPSLIG GADPAITPGG LLGVNFFTLD SRFNNSVKYT NGFAGAKLSA SYSFGGVAGN QRAGSNYSAA ASYDTGPLRG GIAYQRTYNA DASQIAQNYY AGGVWQIGPV RAYLSYLVLT VSGSTKAPSQ RRDDVPQGGV VWQITPAFAV TAAYYDDIAS NLGNVKGASG HKQTAYVIGE YFLSKRTEIY VEADRNHFSG AYRKDPTNIA VLNRSPGSSG ITGISVGLQT KF
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