Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1688 |
Symbol | |
ID | 4005011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 3040937 |
End bp | 3042142 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637947938 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_559319 |
Protein GI | 91784113 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.529041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.197247 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAAC GTCTGACACT GCTCGGTTCC ACGGGCTCGA TTGGAGACAG CACGCTCGAC GTCGTCGCGC GTCATCCTGA GCGCTTTTCG GTCTATGCGT TGAGCGCGCA TCGCAATGGC GACAAACTCG TCGAGCAATG CCTGCGCTTT GAGCCGGAAG TCGCGGTGGT CGGCGACGCC GACACGGCCG CGCGCGTCGC GGCGAAATTG CGCGAGGCGG GTTGCAAGAC CGAGGTCACG TACGGGCCGC AGGCGCTCGT CGACGTGTCG GAGAGCGACG GCTGCGATAC GGTGGTGGCG GCGATCGTCG GCGCGGCGGG CCTCGCGCCG AGTCTTGCCG CCGCGCGCGC CGGCAAACGC ATCCTGCTCG CCAACAAGGA AGCGCTGGTC ATGTCCGGCG CGATCTTCAT GGACGCGGTG CGCGACAACG GCGCCGTCCT GCTGCCGGTG GACAGCGAGC ACAACGCGAT TTTCCAATGC CTGCCGCGCG AAGCCGCGCT GCACGGCGGC GTCTCCAAGA TCATCCTGAC CGCTTCGGGC GGCCCGTTCC GCACTCGCGA ACCGGCCACG CTCGTCGACG TCACGCCGGA AGAAGCCTGT AAGCATCCGA ACTGGGTCAT GGGCCGCAAG ATCTCGGTCG ACTCGGCCAC CATGATGAAC AAGGGCCTCG AGGTGATCGA GGCACACTGG CTGTTCGATC TGCCGGGCGA GCGCATCGAC GTGCTGATTC ACCCACAAAG CGTGATTCAC TCGCTGGTCT CTTACGCCGA CGGTTCGGTG CTCGCGCAAC TCGGCAACCC CGACATGCGC ACGCCGATCG CACACGCGCT GGCCTTCCCG GATCGCGTGG ATTCGGGCGT TGCGCAACTC GATCTCGCGC AGATCGCGTC GCTCTCGTTC GAAAAGCCGG ATTACGCGCG CTTTCCGTGC CTCGCACTCG CCATGAAGGC GCTGGCCGAG GGCGGTGTGG CGAGCGCGGC TCTGAACGCC GCGAACGAAA TTGCGGTGGA AGCGTTCCTG TCGCGGCAGA TCGGTTTCAT GGCGATTGCC CAGGTGGTCG ACGCCGTGCT GAACACGTTG CCGAACCGCA GCGCGCACGC ACTCGAAGAC GTGCTCGAAG CCGATGCCGC CGCGCGTCGC GCCGCTGCCG AATTCATCGC GCGTCTGCCC GACGGCGCCC GTCGCACGGA ACGCGCCGTC CAGTGA
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Protein sequence | MQKRLTLLGS TGSIGDSTLD VVARHPERFS VYALSAHRNG DKLVEQCLRF EPEVAVVGDA DTAARVAAKL REAGCKTEVT YGPQALVDVS ESDGCDTVVA AIVGAAGLAP SLAAARAGKR ILLANKEALV MSGAIFMDAV RDNGAVLLPV DSEHNAIFQC LPREAALHGG VSKIILTASG GPFRTREPAT LVDVTPEEAC KHPNWVMGRK ISVDSATMMN KGLEVIEAHW LFDLPGERID VLIHPQSVIH SLVSYADGSV LAQLGNPDMR TPIAHALAFP DRVDSGVAQL DLAQIASLSF EKPDYARFPC LALAMKALAE GGVASAALNA ANEIAVEAFL SRQIGFMAIA QVVDAVLNTL PNRSAHALED VLEADAAARR AAAEFIARLP DGARRTERAV Q
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