| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1671 |
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| Symbol | |
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| ID | 4003358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 3063104 |
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| End bp | 3064321 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637947955 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_559336 |
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| Protein GI | 91784130 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0235103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCCGC TACTCGACTC CCTTCAGCCC TACCCGTTCG AAAAGCTGCG CGCGCTTTTC
AAGGACGTCA CGCCGAACGC CGGCCTCGCG CACATCAGCT TCGGCATCGG CGAGCCGAAA
CACCCTACGC CCGCGCTGAT CCGCGACGCC GTGGTGGCCT CGCTCGGCGG CTTGTCCGCG
TATCCGGCCA CGAGCGGATC GCCCGCCTTG CGCGAGTCGA TCGCGAAGTG GGTCACACAG
CGCTACAACC TGCCGCCGGT CGATCCGGCC ACCCAGGTGT TGCCGGTATC GGGTTCGCGC
GAGGCGCTGT TCTCCCTCGC CCAAACCGTG CTCGACCCGC AAAAGAATGC CGGCGGCGAG
CCTGCGATCG TACTCTGTCC GAACCCGTTC TACCAAATCT ACGAAGGCGC GGCGATTCTG
GCCGGCGCGC AGCCGTATTT CGTGAATAGC GACCCGGCGC GCAACTTCGC CTGCGACTAT
TCGGCGGTGC CGGCCGAGAT CTGGGCGCGC ACGCAACTGC TCTACGTTTG TTCGCCCGGC
AATCCGACCG GCGCGGTGCT CACGCTCGAC GACTGGCGCG AGCTGTTCGC GCTGTCGGAC
CGCTACGGCT TCGTGATCGC CTCGGACGAG TGCTACTCCG AAATTTACTT CGACGAAGCC
AAGCCGCCGC TCGGCGGCCT GGAAGCGGCC CATAAGCTCG GCCGCGGTTT CGAGCGGCTC
GTCATGCTGT CGAGCCTGTC CAAGCGCTCG AACGTGCCTG GCATGCGCTC GGGCTTCGTC
GCGGGCGACG CGGCGATTCT CAAAGACTTC CTGCTCTACC GGACCTACCA CGGCGCGGCC
TTGTCGACGG TGTTCCAGAA CGCCAGCATC GCGGCCTGGA ACGACGAGGC ACACGTGCGC
GAGAACCGCG CGAAGTACCT GCAGAAGTTT TCCACCGTCA CGCCGATGCT CGCCGAGGTG
CTCGACGTGC GCCTGCCGGA CGCGGCGTTC TACCTGTGGG CAGACGTCTC GCGCACGGGT
CTCACGGATA CCGTGTTCGC CCAGCGCCTC TACGCCGACT ATAATGTGAC GGTTCTGCCG
GGCTCGTTCC TCGCGCGCAC TGCGCACGGC GTGAACCCCG GCCGCAATTT CGTGCGCATG
GCGCTCGTTG CCGACGTCGA CGAATGCACG CAGGGCGCGC AGCGGATCGT CGATTTTTGC
CGTGCGCTGG CGGGTTAG
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| Protein sequence | MNPLLDSLQP YPFEKLRALF KDVTPNAGLA HISFGIGEPK HPTPALIRDA VVASLGGLSA
YPATSGSPAL RESIAKWVTQ RYNLPPVDPA TQVLPVSGSR EALFSLAQTV LDPQKNAGGE
PAIVLCPNPF YQIYEGAAIL AGAQPYFVNS DPARNFACDY SAVPAEIWAR TQLLYVCSPG
NPTGAVLTLD DWRELFALSD RYGFVIASDE CYSEIYFDEA KPPLGGLEAA HKLGRGFERL
VMLSSLSKRS NVPGMRSGFV AGDAAILKDF LLYRTYHGAA LSTVFQNASI AAWNDEAHVR
ENRAKYLQKF STVTPMLAEV LDVRLPDAAF YLWADVSRTG LTDTVFAQRL YADYNVTVLP
GSFLARTAHG VNPGRNFVRM ALVADVDECT QGAQRIVDFC RALAG
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