| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1636 |
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| Symbol | |
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| ID | 4003744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 3102873 |
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| End bp | 3104837 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637947995 |
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| Product | ABC peptide transporter, periplasmic ligand binding protein |
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| Protein accession | YP_559371 |
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| Protein GI | 91784165 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.106746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.365226 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACTG GCTCGCGACG GGTTCCAACG CCTTGCGCAC CTCAGCGCAG CGCGATTCAC
AGACCCTCGC GCGCCGGCTT CGCGCTCGTG CCGCGTTCAT GGCGCTCCCG TTGCGCAGCC
ATGCTGTGCG GTGTGCTGGC GGTGGCGGGT TTCCTCGTGG CGCCGGGGGC GCATGCGGTC
TATGCGATCG CGCAATACGG CGACCCGAAA TATCCGGCGA ATTTCAAGCA CTTCGACTAC
GTCAACCCGG ACGCGCCGAA GGGCGGCACG CTGGTGCTGG CCAATCCGAG CCGCCTCACG
AGCTTCGATA AATTCAATCC GTTCACACTG CGCGGCAATA CCGCACCCGG TGTGGATCTG
ATGTTCGAAA GCCTCACCAC CGGCAGCAGC GACGAAGTGG CGTCCGCCTA TGGGTTGCTC
GCCGACGACA TCAGCATCGC GCCGGACGGC TTGTCGGTCA CCTTCCACAT CAATCCGCGC
GCGCGCTTTT CGAACGGCGA TCCGGTCACC GCCGACGACG TCAAGTTTTC GCTCGATACG
CTGAAAAGCC CGCAGGCCGC GCCGCAATTC GCATCGATCT TCGGCGAGAT CACGCGTGCG
GTGGTGGTCG ATCCGCAGAC GATCCGCTTC GAGTTTCGCC AGCGCAATCG CGAGTTGCCG
TTACTCGCCG GCGGTATGCC GGTGTTCTCG CGCAAGTGGG GGATGAAGCC GGACGGCAGC
CGCATTCCGT TCGACCAGCT CGCGTTCGAA AAGCCGATCA GCAGCGGTCC TTATCTGATC
GAGCAGTACG ACAACGGCCG AACGATCACG TACCGGCGCG ACCCGAATTA CTGGGGCGCG
GCGCTGCCGG TGCGCGTCGG CACGAACAAC TTCGATCACA TTGTCTACAA GCTGTATTCG
GACAGCACGG CGCGCCTGGA AGCGTTCAAG GCGGGCGAGT ACGATGCGCT GGTCGAGTAT
GTCGCGCGCA ATTGGGTGCG GCGTGACGTG GGCAAGAAGT TCGATAACGG CGAGCTGATC
AAGCAGGTGT TTCCGCAACA TAACGGCACC GGCATGCAGG GCTTCATGCT GAACACACGG
CGGCCTTTGT TTCAGGACGT GCGCGTGCGC AAGGCGCTCG ATCTCGCGCT CGATTTCCAG
TGGCTCAACC GCCAGCTGTT CTTCAATCAG TACACGCGTA TCGACAGTTT CTTCGCCAAT
ACCGATCTGC AGGCGAAGGG GCTGCCGTCG CCAGGTGAAT TGGCGTTGCT CGAACCGTGG
CGCGCGAAAC TCGACCCGGC GGTGTTCGGT CCGCCGCCCA GGCAGCCGGA CACCGATCCG
CCGGGCTCGC TGCGCGCCAA TCTGCTGCAG GCGCGCGCGC TATTGCAGGA GGCCGGCTGG
ACCTATCGCG ACGGCGCGTT GCGCAATGCC AAAGGCGAGC CGTTCCGCTT CGAGATTCTC
GACGACTCCG GCTCGTCCGC GCAGATGGAG CCGATCGTCG CGACCTTCAT CCGCAATCTG
CAGAAGCTCG GCATCGAAGC CACGTTTCGC GTGTCGGACT TTGCGGTCTA TCAGAAGCGT
CTGGACAGCT TCGATTTCGA CACCACCACC ATCCGCATGC CGGATGTGCA GGTGCCCGGT
TCGGAGCAGA TCGAGCGCTT CGGCAGCAAG GCCGCGGATA CGCAAGGCTC CGACAACATG
ATCGGGCTGA AGTCGCCCGC GGTCGATGCC ATCCTCAGCG CGCTCGTGCA TGCGCAGACG
CGCGAGCAGC TGATCGACGC CACCCACGCG CTCGACCGCG TGCTGATGCA TGGCTACTAT
GTCGTGCCGC ACTGGTACAG CGCGACGCAC CGGGTGGCGT TCAAGCGCGG CCTCGCGTGG
CCAAAAACAT TGCCCCTGTA CTATTCAGCG GAAGGCTGGA TCACGTCGAC GTGGTGGTTC
GCGCAGCCAC AAGCGCAGCC GCAAGCCCAG GCCCAGCCGC GCTAA
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| Protein sequence | MTTGSRRVPT PCAPQRSAIH RPSRAGFALV PRSWRSRCAA MLCGVLAVAG FLVAPGAHAV
YAIAQYGDPK YPANFKHFDY VNPDAPKGGT LVLANPSRLT SFDKFNPFTL RGNTAPGVDL
MFESLTTGSS DEVASAYGLL ADDISIAPDG LSVTFHINPR ARFSNGDPVT ADDVKFSLDT
LKSPQAAPQF ASIFGEITRA VVVDPQTIRF EFRQRNRELP LLAGGMPVFS RKWGMKPDGS
RIPFDQLAFE KPISSGPYLI EQYDNGRTIT YRRDPNYWGA ALPVRVGTNN FDHIVYKLYS
DSTARLEAFK AGEYDALVEY VARNWVRRDV GKKFDNGELI KQVFPQHNGT GMQGFMLNTR
RPLFQDVRVR KALDLALDFQ WLNRQLFFNQ YTRIDSFFAN TDLQAKGLPS PGELALLEPW
RAKLDPAVFG PPPRQPDTDP PGSLRANLLQ ARALLQEAGW TYRDGALRNA KGEPFRFEIL
DDSGSSAQME PIVATFIRNL QKLGIEATFR VSDFAVYQKR LDSFDFDTTT IRMPDVQVPG
SEQIERFGSK AADTQGSDNM IGLKSPAVDA ILSALVHAQT REQLIDATHA LDRVLMHGYY
VVPHWYSATH RVAFKRGLAW PKTLPLYYSA EGWITSTWWF AQPQAQPQAQ AQPR
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