| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1609 |
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| Symbol | |
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| ID | 4005565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 3134210 |
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| End bp | 3136555 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637948023 |
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| Product | S1 RNA-binding domain-containing protein |
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| Protein accession | YP_559398 |
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| Protein GI | 91784192 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.217486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.534196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAA CCGTAGCACT CAAGATCGTA CAGCGCATCG CCGCCGAACT GTCCGTCCAG
CCGCGCCAGG TCGCGGCCGC GGTGCAACTT CTCGACGAAG GAGCGACTGT TCCGTTCATC
GCCCGCTACC GTAAGGAAGT GACCGACAAT CTCGACGACA CGCAGTTGCG CAACCTCGAG
GAACGCCTGC TGTATCTGCG CGAGCTGGAA GACCGGCGCG CGGCGATCAT CGCCAGCATC
GACGAACAGG GCAAGCTCAC CGACGAGCTG CGCGCCGCGA TCGAAGGCGC CGACAGCAAG
CAGGTGCTGG AAGACCTGTA TCTCCCGTAC AAGCCGAAGC GCCGCACGCG CGCGCAGATC
GCCCGCGAAG CGGGCCTTCA GCCGCTCGCC GACGCGCTGC TGGCCAATCC GCGGCTCGAC
CCGCAAACCG AAGCCGCCGC CTACGTGGAC GCCGAGAAAG GCGTCGCCGA CGTCAAGGCC
GCGCTCGACG GCGCGCGCGA CATCCTTTCG GAGCAGTTCG GCGAAACGGC CGAGTTGCTC
GGCAAGCTGC GCGACTACCT GTTCAACCAG GGCGTGGTGT CGTCGAAAGT GGTGGAAGGC
AAGGAAAACG CCGAAGAAGA GAAGTTCCGC GATTATTACG ACTACTCGGA AACCATCCGC
ACCGTGCCGT CGCATCGCGC GCTGGCGCTG TTCCGCGGCC GCAATGCCGG CGTGCTGATG
GTCAAGCTCG GCCTCGGCGA AGAACTCGAC GCGCAGGTGC CGCATCCGGG CGAAGCGCTG
ATCGCGCGCC ACTTCGGCAT TGCCAATCAG AACCGTCCGG CCGACAAGTG GCTCTCCGAT
GTGTGCCGCT GGTGCTGGCG CGTGAAGGTG CAGCCGCATA TCGAAAACGA ATTGCTGACC
AATCTGCGCG ACGAAGCCGA GCACGAAGCG ATCCGCGTGT TCGCGCGCAA TCTGAAGGAC
TTGTTGCTCG CCGCGCCCGC TGGCCCGAAA GCCGTGATTG GCCTCGATCC GGGCATGCGC
ACCGGCGTGA AGGTGGCCGT GGTTGATCGC ACCGGCAAGG TGCTCGCCAC CGACGTGATC
TATCCGCACG AGCCGCGCCG CGACTGGGAC GGCTCGATCG CGAAACTCGC GCGCATCTGC
GCGCAGACGC AGGCTGAACT GATCAGCATC GGCAACGGCA CGGCGTCGCG TGAAACGGAC
AAGCTCGCGA GCGAACTGAT CGCGCGTCAT CCGGAATTCA AGCTGCAGAA GATCGTCGTG
TCCGAAGCCG GCGCGTCGGT GTACTCGGCC TCTGAACTCG CGGCGAAGGA ATTCCCCGAC
ATGGACGTGT CGCTGCGCGG CGCGGTGTCG ATTGCACGCC GTCTGCAGGA TCCGCTTGCG
GAACTGGTGA AGATCGAGCC GAAGGCGATC GGCGTCGGCC AGTATCAGCA CGACGTGAAC
CAGCGCGAAC TGGCCCGTTC GCTCGATGCC GTGGTCGAAG ACTGCGTGAA CGCCGTCGGC
GTGGATGCGA ATACCGCGTC CGTCGCGCTG CTCGCCCGCG TGTCGGGTCT GAATGCCACG
CTGGCGCGCA ATATCGTCGA CTATCGCGAT GCGAACGGCC CGTTCCCGTC GCGCGAACAT
CTGCGCAAGG TGCCGCGTCT GGGCGACAAG ACCTTCGAGC AGGCCGCCGG GTTCCTGCGC
ATCAACAACG GTGAGAATCC GCTCGACCGT TCGTCGGTTC ACCCGGAAGC GTATCCGGTC
GTCGAACGCA TGCTCGCGAA AATCAGCAAG CATGTGGGTG AAGTGCTGGG CAATCGGGAC
GCACTGCGCG GGTTGTCGCC CGCGGAATTC GTCGACGATC GCTTCGGTCT GCCGACCGTG
CGCGACATTC TGCTCGAACT CGAAAAGCCG GGCCGCGATC CACGCCCCGA ATTCAAGACC
GCGACGTTCC GCGAAGGCGT CGAGAAGGTC AGCGATTTGA CACCGGGCAT GGTGCTCGAA
GGCGTCGTAA CGAACGTGGC GGCATTCGGC GCGTTCATCG ACATCGGTGT GCATCAGGAC
GGTCTGGTGC ACGTGTCGGC CATGTCGACG AAGTTCATCA AGGACCCGCA TGAAGTCGTC
AAGGCCGGCC AGATCGTCAA GGTGAAGGTG CTGGAAGTGG ACGTGAAGCG CCAGCGTATC
GCGCTGACCA TGCGGATGGA CGACGAAGTC GGCGCAGCGT CGGCGCGCAG CGGCGGCGCC
CAGCAGGACC GCGGCGGCGC GGGCCGCTCA GGTGGCGGCG GACGCGGCGC GCCGCAACAG
CGCTCGCGTG AGCCGGAACC GGGCGGCGCA ATGGCGGCGG CATTCGCCAA GCTCAAGCAG
AAGTAA
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| Protein sequence | MTETVALKIV QRIAAELSVQ PRQVAAAVQL LDEGATVPFI ARYRKEVTDN LDDTQLRNLE
ERLLYLRELE DRRAAIIASI DEQGKLTDEL RAAIEGADSK QVLEDLYLPY KPKRRTRAQI
AREAGLQPLA DALLANPRLD PQTEAAAYVD AEKGVADVKA ALDGARDILS EQFGETAELL
GKLRDYLFNQ GVVSSKVVEG KENAEEEKFR DYYDYSETIR TVPSHRALAL FRGRNAGVLM
VKLGLGEELD AQVPHPGEAL IARHFGIANQ NRPADKWLSD VCRWCWRVKV QPHIENELLT
NLRDEAEHEA IRVFARNLKD LLLAAPAGPK AVIGLDPGMR TGVKVAVVDR TGKVLATDVI
YPHEPRRDWD GSIAKLARIC AQTQAELISI GNGTASRETD KLASELIARH PEFKLQKIVV
SEAGASVYSA SELAAKEFPD MDVSLRGAVS IARRLQDPLA ELVKIEPKAI GVGQYQHDVN
QRELARSLDA VVEDCVNAVG VDANTASVAL LARVSGLNAT LARNIVDYRD ANGPFPSREH
LRKVPRLGDK TFEQAAGFLR INNGENPLDR SSVHPEAYPV VERMLAKISK HVGEVLGNRD
ALRGLSPAEF VDDRFGLPTV RDILLELEKP GRDPRPEFKT ATFREGVEKV SDLTPGMVLE
GVVTNVAAFG AFIDIGVHQD GLVHVSAMST KFIKDPHEVV KAGQIVKVKV LEVDVKRQRI
ALTMRMDDEV GAASARSGGA QQDRGGAGRS GGGGRGAPQQ RSREPEPGGA MAAAFAKLKQ
K
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