Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1479 |
Symbol | |
ID | 4003096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 3282680 |
End bp | 3283477 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637948153 |
Product | ABC polar amino acid transporter, inner membrane subunit |
Protein accession | YP_559527 |
Protein GI | 91784321 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.121891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.836923 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCACACG CTCCGCATCT TGTCTTCGAT ATGCCGTTTT TCCTGCACTT CGTGTTCGAT CCGCGTCCGG CTCTACTGCA GGGACTGGTC GTCACGGTAC TTGGGGCGGC CATAGCGCAA CTGCTCGGCA CCGTGATCGG CGTTGTGCTG GGGCTGTCGG GCATGCACCG CGCGCTCCCG CTGCGCGTGC TGAATCAGGG CTACATCTGG TTCTTTCGCG GCACGCCGGT ACTGGTTCAA CTGGTGCTGA TCTATTTCGG ACTGCCGTAT CTGGTGGGTT TCGATCTGTT TCCCGCCGTG ATGTCGCTCG GGCCGCTGCA TCTCAGCGGC GCGTTGGTAG CCGGTGTGAT CGCGTTCGGG TTGCATGAAG CCGCGTACAT GAGCGAGATC ACGCGTGCAA GCGTTGGCTC GATCGATCCC GGCCAGATGG AAGCGGCGCT TGCCGTCGGC ATGACGCCCG CAATGGCGAT GCGTCGCATC GTGCTGCCGC AGGCGGTGCC GCTCATCGTG CCGGCGCTCG GCAACCAGTT CAACAACATG CTGAAGACGA CGGCGCTGCT GAGCGTGATC GGCGTGTCGG AGATGTTTCG CGTGGCCGAG CAGATGCAGG CCGCGACCTT CATGACCTTC GAGGTGTATC TGGGCGTGTC GGTCTATTAC CTGATGCTGA CCGGCGTCTG GACTTTCATA CAGCACGGGC TCGAGTCGTG GCTTTCGCGC GGCGGCCGCA ACGGCAAGCG GCAATCCGCG AAAGCAACCA AGGCGCCGCG AGCCCGGGCG GCGAGTGGCA ACTCGTGA
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Protein sequence | MPHAPHLVFD MPFFLHFVFD PRPALLQGLV VTVLGAAIAQ LLGTVIGVVL GLSGMHRALP LRVLNQGYIW FFRGTPVLVQ LVLIYFGLPY LVGFDLFPAV MSLGPLHLSG ALVAGVIAFG LHEAAYMSEI TRASVGSIDP GQMEAALAVG MTPAMAMRRI VLPQAVPLIV PALGNQFNNM LKTTALLSVI GVSEMFRVAE QMQAATFMTF EVYLGVSVYY LMLTGVWTFI QHGLESWLSR GGRNGKRQSA KATKAPRARA ASGNS
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