| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1394 |
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| Symbol | |
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| ID | 4005298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 3376619 |
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| End bp | 3377539 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637948239 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_559612 |
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| Protein GI | 91784406 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.560353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.490108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCAG CTTCGTCGAG CACCTCGCCG CCGTCAAACG GCTATCGTTC GGTTTTCCGC
GAAGGCCTCT TCGCCGGCAA AGTCATTATC GTCACCGGCG CGGGTAGCGG TTTAGGCCGA
TGCACCGCGC ACGAACTCGC ATCCTTAGGC GCAACCCTGG CGCTGGTCGG CCGAAGCGAG
GACAAACTGA AAGCGGTGCA AGCCGAACTG GCCGAAGATC ATCAACGCAC CTCCGCCGGA
CACAAGACCT ATTCCTGCGA CATCCGCAAC GAGCAACAGG TCCGCGAAAC GATCGCTTCG
ATCATTGCGG ATCTGGGCCG CGTAGACGGC CTCTTCAATT GCGCGGGCGG CCAGTTCCCC
GCGAAGCTCG AAAAGATTTC CCTGAATGGC TGGGACGCGG TAGTGCGCAA CAATCTGCAC
GGCACGTTTC TGATGTCCCG CGAATGCTAT ACGCAATGGA TGGAACATCA CGGCGGAACG
ATCGTGAACA TGCTGGCGGA TATCTGGGGC GGCATGCCCG GCATGGGTCA CTCGGGCGCG
GCGCGGGCGG GCGTGTGGAA CTTCACGGAA ACCGCCGCAT GCGAATGGGG CCACGCGGGG
GTGAGAGTCA ACGCGGTCGC GCCGGGCTGG ATAGCGTCCG CGGGTATGGA CAGCTACAAC
GAAGACTACC AGGCGCTGTT GCGCACGCTC AGGCATAAGG TCCCGCTGCA GCGCTTCGGC
ACCGAATCCG AACTGGCCGG CGCGGCGGTG TTTCTGTTGT CGGAGGCGTC GGCGTTCATC
AACGGCACGG TGATCCGCGT CGACGGCGGC GTGCCGAACG CGCGCCACTC GTGGCCGCTT
CCGCCGGCGG AGCGTACGAT CGAATATAAC GGCTTCCCGC GTTATCAACC GCCGACGGGC
TTGCAGGAGC AGACACCATG A
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| Protein sequence | MPAASSSTSP PSNGYRSVFR EGLFAGKVII VTGAGSGLGR CTAHELASLG ATLALVGRSE
DKLKAVQAEL AEDHQRTSAG HKTYSCDIRN EQQVRETIAS IIADLGRVDG LFNCAGGQFP
AKLEKISLNG WDAVVRNNLH GTFLMSRECY TQWMEHHGGT IVNMLADIWG GMPGMGHSGA
ARAGVWNFTE TAACEWGHAG VRVNAVAPGW IASAGMDSYN EDYQALLRTL RHKVPLQRFG
TESELAGAAV FLLSEASAFI NGTVIRVDGG VPNARHSWPL PPAERTIEYN GFPRYQPPTG
LQEQTP
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