| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1391 |
|---|
| Symbol | |
|---|
| ID | 4005301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 3379533 |
|---|
| End bp | 3381653 |
|---|
| Gene Length | 2121 bp |
|---|
| Protein Length | 706 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637948242 |
|---|
| Product | short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase |
|---|
| Protein accession | YP_559615 |
|---|
| Protein GI | 91784409 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.587506 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTCA ATCCATCAGC CGACGTTGTG ACGCGCGAAT TGCGCGGCAA GGTGCTGCTC
GTGACGATCG ACCACGCACC GGTCAACGCC CTCTCCGCCG ACGTGCGGCG CGGTCTGCTC
GCCGCCGTCG AAGCCGCGGA CGCCGATAGC GCCGTGCAAG CCGTGCTGAT CGTCGGTGCG
GGGCGCAATT TCATCGCCGG CGCGGACATT CGCGAGTTCG GCAAGCCGCC GCTGCCGCCC
GCGCTCCCGG ACGTATGCAA CCGCATCGAA GCGTGCACGA AACCGGTGGT GGCCGCGATT
CACGGCGCGG CGCTCGGCGG CGGTCTGGAA GTGGCGCTCG CGGCGCACTA CCGGATTGCC
GTGGAAGGCG CGAAACTCGG CCTGCCCGAA GTGCAGCTCG GCCTGTTGCC GGGCGCGGGC
GGCACGCAGC GCACGCCGCG CCTGATCGGC GCGCAGGCCG CGCTCGATCT GATCCTGAGC
GGCCGCCATG CGAGCGCGAA GGAAGCGCTG GCGCTCGGCC TGATCGACCG CCTGGGCAGC
AGCGGCGACA TCCTCGCCGA AGGACTCGCG TATGTACACG AGTTGCTGGC CGCCCACGCG
CCGGTGCGCC GCACGCGCGA CGCCGTAGCG CCCGGCGACC GCGCCGCGAG CCTCGCTGCC
GTAACCGCAG CGCGCGCGGA AACCGCGAAG AAATCGCGCG GCCTGTTCTC GCCGCTGAAA
ATCGTCGACG CCGTCGAGGC CGCCATCGAA CAGCCCTTCG ACGAAGGTCT GCGACTCGAA
CGCAAACTGT TCCTCGAATG CCTCGACAGC CCGCAGCGCG CCGGACTGAT TCACGCGTTC
TTTGCCGAGC GCGAAGTGCT CAAGGCGCCC GAAACGCGCG ACGCCAAACC GCGCGCGCTG
AACGCGATCG GCGTGGTGGG CGGCGGCACG ATGGGCGCGG GCATCGCTGT CGCGGTGCTC
GACGCGGGCC TGCCGGTGAC CATGATCGAG CGCGACGACG CCTCGCTTGC GCGTGGCCTC
GCGCACATCG AAAAAGTCTA CGATGGCCTG ATCGCCAGGG GCCGCATGAG CGCGGAGAAG
AAAGCGGCGG TCATGACGCG CTGGAACGGC AGTACCTCTT ACGATGCACT CACCGATGCC
GATCTCGTGA TCGAAGCCGT GTTCGAAGAC CTCGCCGTCA AACAGGCCGT ATTCGCCGAA
CTCGATCGCG TCTGCAAAGC AGGCGCCGTG CTCGCGACCA ACACGTCGTA TCTCGACATC
GACGCCATTG CCGCGAGCAT TTCGCGCCCC GCCGACGTGA TCGGCCTGCA CTTCTTCTCG
CCCGCCAACA TCATGAAGCT GCTGGAAGTG GTCGTGCCGA AACGGGTCAG CGCGGACGTA
GTCGCCACCG CGTTCGAGCT CGCGAAAAAA TTGCGCAAAA CGCCGGTGCG CGCGGGCGTG
TGCGACGGCT TCATCGGCAA CCGGGTGCTG GCCGTGTACC GCGCCGCCGC GGACGCCATG
ATGGAAGACG GCGCCTCGCC CTATCAGATC GACGCCGCCG TGCGTGCGTT CGGCTTTCCG
ATGGGACCGT TCCAGGTGGT GGATCTGGCG GGCGGCGACA TCGGCTGGGC GGCACGCAAG
CGGCGCGCGG CCACCCGCAA TCCCGCAGCA CGGTACGTGC AGATCGCCGA TCGCCTGTGC
GAGCGCGGCT GGTTCGGCCA GAAAACCGGC CGCGGCTTTT ATCTGTACCC CGAAGGATCG
CGCAGCGGCA CGCCCGACCC CGAAGTGGAA GCGATCATCG ACGCCGAGCG CGCACGCGCC
GGCATCACGC CGCGCAGCTT TACCGATGAC GAGATCATCC GCCGCTATAT GGCCGCGATG
ATCAACGAAG GCGCCAACGT CGTGCACGAG CGTATCGCGC TGCGGCCGCT GGACGTCGAC
GTGACGCTCC TGTACGGCTA TGGCTTTCCG CGCTATCGCG GCGGTCCGAT GAAATACGCG
GACATGGTCG GCCTGCCCAA GATTCTTGCC GACATCCGCG AATTCGCCAA AGAGGATCCG
CTCTTCTGGA AGGCCTCGCC GCTGCTCGTG GAACTGGTGG AACGGGGCGC CGATTTCGCG
AGCCTGAACC AGACGGCCTG A
|
|---|
| Protein sequence | MTLNPSADVV TRELRGKVLL VTIDHAPVNA LSADVRRGLL AAVEAADADS AVQAVLIVGA
GRNFIAGADI REFGKPPLPP ALPDVCNRIE ACTKPVVAAI HGAALGGGLE VALAAHYRIA
VEGAKLGLPE VQLGLLPGAG GTQRTPRLIG AQAALDLILS GRHASAKEAL ALGLIDRLGS
SGDILAEGLA YVHELLAAHA PVRRTRDAVA PGDRAASLAA VTAARAETAK KSRGLFSPLK
IVDAVEAAIE QPFDEGLRLE RKLFLECLDS PQRAGLIHAF FAEREVLKAP ETRDAKPRAL
NAIGVVGGGT MGAGIAVAVL DAGLPVTMIE RDDASLARGL AHIEKVYDGL IARGRMSAEK
KAAVMTRWNG STSYDALTDA DLVIEAVFED LAVKQAVFAE LDRVCKAGAV LATNTSYLDI
DAIAASISRP ADVIGLHFFS PANIMKLLEV VVPKRVSADV VATAFELAKK LRKTPVRAGV
CDGFIGNRVL AVYRAAADAM MEDGASPYQI DAAVRAFGFP MGPFQVVDLA GGDIGWAARK
RRAATRNPAA RYVQIADRLC ERGWFGQKTG RGFYLYPEGS RSGTPDPEVE AIIDAERARA
GITPRSFTDD EIIRRYMAAM INEGANVVHE RIALRPLDVD VTLLYGYGFP RYRGGPMKYA
DMVGLPKILA DIREFAKEDP LFWKASPLLV ELVERGADFA SLNQTA
|
|---|
| |