Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1292 |
Symbol | |
ID | 4003271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 3498521 |
End bp | 3499888 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637948343 |
Product | multi anti extrusion protein MatE |
Protein accession | YP_559713 |
Protein GI | 91784507 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.110492 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGACG CCGCGCGCGA CGCGGACCCA TCGGCAGCGG CGCCCGCCGT TCCGGTGCGC TGGCACCGCC GGGTGCTGGC GCTGGCTTTT CCCATCGTCC TCGCCAATCT GACGCAGCCG ATTCTCGGCG CCGTCGACAC GGCCGTCGCC GGTCATCTGG ACGGCGCGTC GTATCTCGGC GGCGTGGCGC TCGGCGGCCT CTTTTTCAAC TTCGTGTTCT GGGGCTTCGG CTTCCTGCGC ATGGGCACCA CCGGTCTGGT CGCGCAGGCG CACGGCGCGA ACGACCAGGC CGGCTTGCGC AACAACGTCG TACGCGCGCT GCTGCTGGCG GCCGCGATCG GCGGCGCGGT GCTGGCGCTG CAAATGCCGC TGATCGATTA CGCGTTGCGC GTGATCGGCG GTAGCGACGC GGTGCAGCGC AACGCGCGGC TCTATTGCCA CGCGCGCATC TGGGCCGCCC CGCTCGCGCT CGGCAATTAC GTCGTGCTCG GCTGGCTGCT CGGCACGCAG CAGGTGCGGC TCGCATTGCT CTCGCAGGTG TTCATCAACA GTGTGAACAT CGTGGCGGTG CTGCTATACG TGTACGTGTT CGATTGGAGC GTGGCCGGCA TCGGCGCGGC CACGGCCACC GCCGACGCGC TCGGCTTCGT GCTCGGCGCC GCGCTGTTGT GGTACGGCAG GCCGCGCGGC CTGCCCGCGC TGAATCGCGC CGCGTTGTTC GACGCCGCCG CCCTCAGGCG GCTGGTGGTG CTCAACCGCG ACATTTTCAT ACGCACGGTG TGTCTGCTTT CGTCGTTCGG CTGGTTTGCG CATCTGGGCG CGCGGCAAGG CGACGCCACG CTCGCCGCCA ACGCGCTGCT GCTCAATTTT CAGACCTTCA TGGCCTACGG ACTCGACGGC TTCGCGCACG CCGCCGAAGC GCTGGTCGGC GCGGCGATCG GCGCGCGCGA CCGGCATGCG TTCACGCAGG CGATCAAGGT GACGGCGCTG TGGTCCACGC TCGGCGCACT GGGGTTCTCG CTGGTGTATT GGAGCGCGGG CTCGTGGATC GTCGAGCGTC TGACGGATCA GGCCGCCGTG CGCGCCGCCG CCGAGATGTA TCTGCCGTGG GCCGCGCTCT CGCCGGTGGT GTCCGTGTGG GGCTTTCTGC TCGACGGCGT GTTCATCGGC GCGACCCGCA CGCGCGAACT GATGACCTCG ATGGTGGTGT CGTTTGCGCT GTTCGTGGCG GCCTCGTGGG CCTTGCTGGC GCTCTACGGC AACCACGGCT TGTGGGCCGC GATGCTGCTG TTCATGGCGC TGCGCGGTCT CACGCTTGGC CGCTATGTGC CCGCCGTCGT ACGCGGCATG GCCGGCGCGG CGGCGTAG
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Protein sequence | MSDAARDADP SAAAPAVPVR WHRRVLALAF PIVLANLTQP ILGAVDTAVA GHLDGASYLG GVALGGLFFN FVFWGFGFLR MGTTGLVAQA HGANDQAGLR NNVVRALLLA AAIGGAVLAL QMPLIDYALR VIGGSDAVQR NARLYCHARI WAAPLALGNY VVLGWLLGTQ QVRLALLSQV FINSVNIVAV LLYVYVFDWS VAGIGAATAT ADALGFVLGA ALLWYGRPRG LPALNRAALF DAAALRRLVV LNRDIFIRTV CLLSSFGWFA HLGARQGDAT LAANALLLNF QTFMAYGLDG FAHAAEALVG AAIGARDRHA FTQAIKVTAL WSTLGALGFS LVYWSAGSWI VERLTDQAAV RAAAEMYLPW AALSPVVSVW GFLLDGVFIG ATRTRELMTS MVVSFALFVA ASWALLALYG NHGLWAAMLL FMALRGLTLG RYVPAVVRGM AGAAA
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