| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1257 |
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| Symbol | carB |
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| ID | 4004250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 3529412 |
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| End bp | 3532666 |
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| Gene Length | 3255 bp |
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| Protein Length | 1084 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637948380 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_559748 |
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| Protein GI | 91784542 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGC GGACAGACAT CAAGAGCATC CTCATCATCG GCGCGGGTCC GATCATCATC
GGCCAGGCGT GCGAGTTCGA CTACTCGGGC GCGCAGGCAT GCAAGGCGCT GCGTGAGGAA
GGCTACAAGG TCATTCTCGT CAACAGCAAT CCGGCGACGA TCATGACCGA CCCGAACACG
GCCGACGTGA CCTACATCGA GCCGATCACG TGGGAAGTGG TCGAGCGCAT CATCGCGAAG
GAGCGCCCGG ACGCGATCCT GCCGACGATG GGCGGCCAGA CCGCGCTGAA CTGCGCGCTC
GATCTGCACG CGCACGGCGT GCTGGAGAAG TACAAGGTCG AGCTGATCGG CGCCTCGCCG
GAAGCGATCG ACAAGGCGGA AGACCGTCAG AAGTTCAAGG ACGCGATGAC CAGGATCGGC
CTCGGTTCGG CCAAATCGGG CACCGCGCAT TCCATGGAAG AGGCGCTCGC CGTGCAAGCG
GACATCGCTT CGCAAACGGG CAGCGGCGGC TATCCGGTCG TGATTCGTCC GTCGTTCACG
CTGGGCGGCT CGGGCGGCGG CATCGCGTAT AACCGCGACG AGTTCGAAGA GATCTGCAAG
CGCGGTCTCG ACCTGTCGCC CACGCGCGAG CTGCTGATCG AAGAGTCGCT GCTCGGCTGG
AAAGAGTACG AGATGGAAGT GGTCCGCGAC AAAAAGGACA ACTGCATCAT CGTCTGCTCG
ATCGAAAACC TGGATCCGAT GGGCATCCAC ACGGGCGACT CGATCACCGT CGCGCCGGCG
CAAACGCTCA CCGACAAGGA ATATCAGGTT CTGCGTAACG CATCGCTCGC GGTGCTGCGC
GAGATCGGTG TCGACACCGG CGGCTCGAAC GTGCAGTTCT CGATCAATCC GAAAGACGGC
CGGATGATCG TGATCGAAAT GAATCCGCGT GTGTCGCGTT CGTCGGCTTT GGCTTCGAAG
GCAACCGGCT TCCCGATCGC CAAGGTCGCG GCCAAGCTTG CGGTCGGCTA CACGCTGGAC
GAGCTGAAGA ACGAAATCAC CGGCGGTCAG ACCCCGGCGT CTTTCGAACC GACCATCGAC
TATGTCGTCA CCAAGATTCC GCGTTTCGCG TTCGAAAAAT TCCGCGAAGC CGATTCGCGT
CTGACCACGC AGATGAAGTC GGTCGGCGAA GTGATGGCGA TTGGCCGCAC CTTCCAGGAG
TCGTTCCAGA AGGCGCTGCG CGGTCTGGAA GTCGGCGTGG ACGGTCTGGA CGAAAAGACC
GATAACCGCG ACGAGATCAT CCGCGAGATC GGCGAAGCCG GTCCGGATCG CATCTGGTAC
GTGGGCGACG CGTTCCGTGT CGGCATGACG GCCGAAGAGA TTTTCGAAGA AACCTCGATC
GACCCGTGGT TCCTCGCGCA GATCGAACAG ATCATCCTGA AGGAAAAGGC GCTGGCTGGC
CGCACGCTCG CGAGCCTTTC GAAGGAAGAG CTGAAGTATC TGAAGCAGAG CGGCTTCTCG
GATCGGCGTC TCGCGAAGTT GCTTGGCGCG AAGCCGGCGC AAGTGCGCCA ACGCCGTATC
GAGCTGAACG TGCGTCCGGT GTACAAGCGC GTCGACACCT GCGCGGCCGA GTTCGCCACG
AAAACCGCCT ACATGTACTC GACCTACGAG GAAGAGTGCG AAGCGAACCC GACGAACAAC
AAAAAGATCA TGGTGCTCGG CGGCGGCCCG AACCGGATCG GCCAGGGCAT CGAGTTCGAC
TACTGCTGCG TGCACGCCGC GCTCGCCATG CGCGAAGACG GCTACGAAAC GATCATGGTC
AACTGCAACC CTGAAACCGT TTCGACCGAC TACGACACGT CCGATCGTCT GTACTTCGAA
TCGCTGACGC TCGAAGACGT GCTCGAAATC GTCGACAAGG AAAAGCCGGT CGGCGTGATC
GTGCAATACG GCGGTCAGAC GCCGCTGAAG CTCGCGCTCG ATCTCGAAGC GAACGGCGTG
CCGATCGTCG GCACGTCGCC GGACATGATC GATGCCGCGG AAGACCGCGA GCGTTTCCAG
AAGCTGCTGC AGGACCTCGG CTTGCGTCAG CCGCCGAACC GCACCGCGCG CGCCGAAGAC
GAAGCGCTCA AGCTCGCCGA CGAAATCGGC TATCCGCTGG TGGTGCGTCC GTCGTACGTG
CTGGGCGGCC GCGCAATGGA GATCGTCCAC GAGCCGCGCG ACCTCGAGCG CTATATGCGC
GAGGCCGTGA AGGTGTCGAA CGACTCGCCG GTGCTGCTTG ACCGCTTCCT GAACGACGCG
ATCGAATGCG ACGTGGATTG CATCTCCGAC GGTGAAGCCG TGTTCATCGG CGGCGTGATG
GAACACATCG AACAGGCCGG CGTGCACTCG GGCGACTCGG CGTGCTCGCT GCCGCCGTAT
TCGCTGTCGA AGGAAACCGT GGCTGAGTTG AAGCGTCAAA CCGGCGCGAT GGCGAAGGCG
CTGAACGTGA TCGGACTGAT GAACGTGCAG TTTGCGATCC AGCAGGTGCC GCAGGCGGAC
GGTTCGAAAG AAGACGTCAT TTACGTGCTC GAAGTGAACC CGCGCGCCTC GCGTACGGTG
CCGTACGTGT CGAAGGCGAC CAGCCTGCCG CTCGCGAAGA TCGCGGCGCG CGCGATGGTC
GGCCAGACGC TCGCGCAGCA AGGCGTGACG AAGGAAATCG ATCCGCCGTA CTTCAGCGTG
AAGGAAGCCG TGTTCCCGTT CGTCAAGTTC CCGGCAGTCG ATCCGGTGCT CGGACCGGAA
ATGCGTTCGA CCGGCGAGGT GATGGGCGTG GGTCAAACCT TTGGCGAAGC GTTGTTCAAA
TCGCAGCTCG CCGCGGGTTC GCGTTTGCCG GAGTCGGGCA CGGTGCTGCT GACCGTGATG
GACGCCGACA AGCCGAAGGC CGTCGAAGTC GCGCGTATGC TGCACGAACT CGGTTATCCG
CTCGTCGCGA CCAAGGGCAC GGCCGCCGCC ATCGAAGCGG CCGGCGTGCC GGTCAAGGTC
GTCAACAAGG TGAAGGACGG CCGTCCGCAC ATCGTCGACA TGATCAAGAA CGGGGAAATC
GCGCTGGTCT TCACGACCGT CGACGAAACC CGCGCCGCGA TCGCCGACTC GCGTTCGATC
CGCATGAGCG CGCAGGCGAA CAAGGTCACG TATTACACGA CCATGTCCGG CGCGCGTGCC
GCTGTTGAAG GTTTGCGCTA TTTGAAAGAC CTGGAAGTCT ATGATTTACA AGGCCTGCAC
GCTCGCCTAA ACTAA
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| Protein sequence | MPKRTDIKSI LIIGAGPIII GQACEFDYSG AQACKALREE GYKVILVNSN PATIMTDPNT
ADVTYIEPIT WEVVERIIAK ERPDAILPTM GGQTALNCAL DLHAHGVLEK YKVELIGASP
EAIDKAEDRQ KFKDAMTRIG LGSAKSGTAH SMEEALAVQA DIASQTGSGG YPVVIRPSFT
LGGSGGGIAY NRDEFEEICK RGLDLSPTRE LLIEESLLGW KEYEMEVVRD KKDNCIIVCS
IENLDPMGIH TGDSITVAPA QTLTDKEYQV LRNASLAVLR EIGVDTGGSN VQFSINPKDG
RMIVIEMNPR VSRSSALASK ATGFPIAKVA AKLAVGYTLD ELKNEITGGQ TPASFEPTID
YVVTKIPRFA FEKFREADSR LTTQMKSVGE VMAIGRTFQE SFQKALRGLE VGVDGLDEKT
DNRDEIIREI GEAGPDRIWY VGDAFRVGMT AEEIFEETSI DPWFLAQIEQ IILKEKALAG
RTLASLSKEE LKYLKQSGFS DRRLAKLLGA KPAQVRQRRI ELNVRPVYKR VDTCAAEFAT
KTAYMYSTYE EECEANPTNN KKIMVLGGGP NRIGQGIEFD YCCVHAALAM REDGYETIMV
NCNPETVSTD YDTSDRLYFE SLTLEDVLEI VDKEKPVGVI VQYGGQTPLK LALDLEANGV
PIVGTSPDMI DAAEDRERFQ KLLQDLGLRQ PPNRTARAED EALKLADEIG YPLVVRPSYV
LGGRAMEIVH EPRDLERYMR EAVKVSNDSP VLLDRFLNDA IECDVDCISD GEAVFIGGVM
EHIEQAGVHS GDSACSLPPY SLSKETVAEL KRQTGAMAKA LNVIGLMNVQ FAIQQVPQAD
GSKEDVIYVL EVNPRASRTV PYVSKATSLP LAKIAARAMV GQTLAQQGVT KEIDPPYFSV
KEAVFPFVKF PAVDPVLGPE MRSTGEVMGV GQTFGEALFK SQLAAGSRLP ESGTVLLTVM
DADKPKAVEV ARMLHELGYP LVATKGTAAA IEAAGVPVKV VNKVKDGRPH IVDMIKNGEI
ALVFTTVDET RAAIADSRSI RMSAQANKVT YYTTMSGARA AVEGLRYLKD LEVYDLQGLH
ARLN
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