Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1155 |
Symbol | |
ID | 4002970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 3629619 |
End bp | 3631154 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637948480 |
Product | MFS efflux system, outer membrane porin |
Protein accession | YP_559845 |
Protein GI | 91784639 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0159689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCAC AACCGCTGCT CTCACAACTG CTGCGACAGG CAGGCACGGC ACTCTGCACG ATCTCCCTGG TCGGTTGCGC GGTTGGTCCT GACTTCGTGA AACCCGACGA CAGGCTCGCA GCCGTTCAAC TGTCGCCCAG GGCGGACTAC GCGCAGGCTC AGGAGACATC CGCCGCGAAC TTCCCGTCTT CATGGTGGAC GTTGTTCAAC GATGACGTAC TGGCGGATCT GCAAGCCCGT GCGCAGGCGG GCAACCTGAA CCTGCAGATG GCTTCCGAGC GCATCGAGCA AAGTCGGGCG CAGTTGGGGA TTGCCTCCTC GCTGCTGCTG CCCAGTGTGG GTGCTTCGGC GGGCTATTCC CGCGAGGCCA TCAGCGAGCA CGGCAAGTTT GCCGCGTTGG GTGCTCCGAC GAGCGCGAGC GACTTCTGGC AGTTGGGATT CGACGCCAGT TGGGAACTCG ACCTATGGGG CCGCGCGCGT CGATCGCGCG AAAGCGCCGC GGCCGCCTTC GAGGCCACGG TGTATGAGCG CGAGGCGGCA CGCGTGGCCC TGTCCGCCGA GGTGGCCCGT ACCTATCTCC AATTGCGCGG CACGCAAGCG CAACTGGACA TCACCCGGCA GAACCTGGAG GTTGCCGATC GCACGCTCCG CCTTGCCGAA AGCCGTGAGC GCAATGGCGT CGCCACACGT TTTGAAACCG CTTCGGCGCG CGCGCAACTG GCAACGGTCG AGGCGCTGGT ACCCGAATTG GTCCAGCGCC GCAACACGCT GATGAACGTC CTGGCATTGC TGCTGGGAGA GCAGCCGCGC GCCCTCGATG CGCAGTTGCT TGAAGCGATG CCTCTGCCGT CGCTTCCTTC CAATGTGCCG GTGGGCCTGC CCTCCGAATT GGCGCACAGG CGGCCGGACA TACAGCGCGC CGAAGCCCAG CTCCATGCTG CGACGGCAGC CATCGGCGTC GCCAAAGCCG ATTTCTACCC GCGAATCGGC CTCAAAGGCA GGGTCGGCGT CGAAGCCTTC GAGTTCAACG ACCTCGACAG TTGGGATTCC CGGTTCTTCT CCGTCGGCCC CACGGTCTAT CTTCCCATCT TCCAGGGCGG GCGTCTGAAG CAGCGCCTGG CGCTGAACGA GGCACGGCAA AGAACTGCCG CCATCGGCTA CCGGCAGACG GTGCTGCAAG CCTGGCATGA AGTGGACAAC GCCCTGGACG CCTGGGCAGC CCAGCAGAAC CGCCATGCCG AGTTGGTGGT TTCGTACGAG CAGAACCAGC AGGCGCTGCA TGCTGCCGAG CGCGGCTATC AGGAAGGCGC TGCCGACTAC CTGAACGTCC TGGCCGCACA GCGCGGTGTC CTCGCAAGCC AGACCAGCCT CAATGCCAGC GCGACCAACG CCGCGCTCAC CCTGGTCAAT CTCTACAAAT CCCTGGGCGG TGGCTGGGAC CCCGGCGCAT TCTCTTCCGA GCAGCAGACC GGCGGCGACG CGTCGCTGAC GACCGCTGTG TCGTCGGCCA CCTCGCAATC GAAGGTTGAC CAATGA
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Protein sequence | MTSQPLLSQL LRQAGTALCT ISLVGCAVGP DFVKPDDRLA AVQLSPRADY AQAQETSAAN FPSSWWTLFN DDVLADLQAR AQAGNLNLQM ASERIEQSRA QLGIASSLLL PSVGASAGYS REAISEHGKF AALGAPTSAS DFWQLGFDAS WELDLWGRAR RSRESAAAAF EATVYEREAA RVALSAEVAR TYLQLRGTQA QLDITRQNLE VADRTLRLAE SRERNGVATR FETASARAQL ATVEALVPEL VQRRNTLMNV LALLLGEQPR ALDAQLLEAM PLPSLPSNVP VGLPSELAHR RPDIQRAEAQ LHAATAAIGV AKADFYPRIG LKGRVGVEAF EFNDLDSWDS RFFSVGPTVY LPIFQGGRLK QRLALNEARQ RTAAIGYRQT VLQAWHEVDN ALDAWAAQQN RHAELVVSYE QNQQALHAAE RGYQEGAADY LNVLAAQRGV LASQTSLNAS ATNAALTLVN LYKSLGGGWD PGAFSSEQQT GGDASLTTAV SSATSQSKVD Q
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