| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1048 |
|---|
| Symbol | |
|---|
| ID | 4005331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 3732494 |
|---|
| End bp | 3733255 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637948589 |
|---|
| Product | branched chain amino acid efflux pump LivE |
|---|
| Protein accession | YP_559951 |
|---|
| Protein GI | 91784745 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
|---|
| TIGRFAM ID | [TIGR00346] 4-azaleucine resistance probable transporter AzlC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0218893 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.990506 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATCCATC GCACCGAAGC CCAGCCCACC AGCCAGGGCC ATTTAAAAGA GTTCACCGCG
GGCGCGCGCG ACATCATTCC GATGATGGTC GGCGCGGCGC CTTTCGGCGT CATTTTCGGC
ACCCTCGTCG CGTCCGGCCC GCTGCACTTA TGGCACGGCC AGCTGATGTC GCTCGTCGTG
TTCGCCGGCT CCGCGCAGTT CATCGCACTC GGCCTGATCG CCGGTCACGC CAGTTTCGCC
GTAATCTGGG CGACCACGCT CGTGGTCAAT CTGCGTCATG TGCTGTACAG CGCCACGCTC
GCACCACACG TCGCGCATCT GTCGGCACGC TGGCGCTGGG CGCTCGGCGC GCTGCTCACG
GACGAAGTCT TTGCCGTCGC GTGGGAACAT TACCGGCATA GGGAGCCCGG CACCGTCGGC
CCGCATTACT TCTTCGGCGC GGGTCTCGCC ATGTATCTGA ACTGGCAGAT CTGGACCGTC
GCCGGCCTGT TGTTCGGCGC GGCGTTTCCG GGGCTGCAAT CGCTCGGCCT CGATTTCGCG
ATGGTCGCCA CCTTCATCGC GATCGTCGTG CCGCAACTCG TCGCGTTGCG CTATATCGCG
GCGGCCGTCA CCGCGGGCAC GCTGGCCTTC TTCTGGCAGG CATGGCCATA CAGACTCGGG
TTGCTGGGCG CAGTATTCGC GGGCGTGGCG GTCGGCGTCC TGCTGTCGAC CTCACGGCCT
AACCTGCGCG GCACGGGCAA GACCGCGGAG GCGTCGCGAT GA
|
|---|
| Protein sequence | MIHRTEAQPT SQGHLKEFTA GARDIIPMMV GAAPFGVIFG TLVASGPLHL WHGQLMSLVV
FAGSAQFIAL GLIAGHASFA VIWATTLVVN LRHVLYSATL APHVAHLSAR WRWALGALLT
DEVFAVAWEH YRHREPGTVG PHYFFGAGLA MYLNWQIWTV AGLLFGAAFP GLQSLGLDFA
MVATFIAIVV PQLVALRYIA AAVTAGTLAF FWQAWPYRLG LLGAVFAGVA VGVLLSTSRP
NLRGTGKTAE ASR
|
|---|
| |