Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A0910 |
Symbol | |
ID | 4002912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 3882594 |
End bp | 3883739 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637948726 |
Product | OmpC family outer membrane porin |
Protein accession | YP_560087 |
Protein GI | 91784881 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0510287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA CACTCATGGT CGCGGCCCTT ACGGGCGTTT TTGCAACGGC GGCACATGCC CAAAGCAGCG TCACGCTGTA CGGCTTGATC GACGCCGGCA TCACCTATAC GAACAACCAG CACGGTCATA GCAACTGGCA GGAAACGAGC GGCTCGGTGA ACGGCAGCCG CTGGGGCCTG CGCGGTTCTG AAGATCTGGG CGGCGGACTG AAGGCCATCT TCACGTTGGA AAACGGCTTC GGCATCAATG ACGGCACGCT CAAGCAAGGC GGCCGCGAAT TCGGCCGTCA AGCCTTCGTG GGCCTGACGA GCGACCAGTT CGGCGCCGTC ACCCTTGGCC GTCAATACGA CAGCATGGTC GACTATGTCG GCCCGCTGGC CCTGACCGGC ACGCAATACG GCGGCACGCA GTTCGCGCAC CCGTTCGACA ATGACAACCT GAACAACTCG TTCCGCGTCA ACAACTCGGT CAAGTACCAG AGCGTGAACT ACGGCGGCTT CAAGTTCGGT GCGTTGTATG GCTTCTCGAA CCAGGCCGAC GGCTTCGCGA ACAACCGCGC ATACAGCGCG GGCGCGTCGT ACAACTGGGG CGGCCTGAAC CTCGCCGCCG CTTACCTGCA ACTGAACAGC AACGGCGCGA GCGGCGCGGC GGCGGCGTTC AATTCGGGCG GCGCGGTGTC GAGCGACAAC ACGTTCTTTG CCGGCCGTCA GCAAACGTGG GGCGCCGGTG CAAACTACGC GTTCGGCCCG GCAACGGTTG GCCTCGTGTA CTCGCAAACG AACCTGTCGA GCCTGGCCGG TATCGGCGCG GGTGCATCCG GTCAAACCGG CGGTATCGGC TTCGCCAACA ACAGCGCTCA CTTCCAGAAC TTCGAAGCGA ACGCCCGCTA TGCGCTCACG CCGGCGGTCA GCATTGCCGG TTCGTACACC TACACCCGTG CAAGCCTGGC TGGCACGCGT CCGCACTGGA ACCAGTTCAA CCTGCAAACC GCATACGCGC TGTCCAAGCG TACCGATGTG TATCTGCAAG GCGAGTATCA GCAAGTCAAC GACAACGCCG TCGTGGATGC CGATATCAAC GGTCTGGCCG CTTCGGGCAA CAACAAGCAG GTCGCTGTGA CCGCAGGTCT GCGTCACCGC TTCTAA
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Protein sequence | MKKTLMVAAL TGVFATAAHA QSSVTLYGLI DAGITYTNNQ HGHSNWQETS GSVNGSRWGL RGSEDLGGGL KAIFTLENGF GINDGTLKQG GREFGRQAFV GLTSDQFGAV TLGRQYDSMV DYVGPLALTG TQYGGTQFAH PFDNDNLNNS FRVNNSVKYQ SVNYGGFKFG ALYGFSNQAD GFANNRAYSA GASYNWGGLN LAAAYLQLNS NGASGAAAAF NSGGAVSSDN TFFAGRQQTW GAGANYAFGP ATVGLVYSQT NLSSLAGIGA GASGQTGGIG FANNSAHFQN FEANARYALT PAVSIAGSYT YTRASLAGTR PHWNQFNLQT AYALSKRTDV YLQGEYQQVN DNAVVDADIN GLAASGNNKQ VAVTAGLRHR F
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