| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0779 |
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| Symbol | |
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| ID | 4005612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 4020004 |
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| End bp | 4021452 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637948851 |
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| Product | major facilitator superfamily drug efflux pump |
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| Protein accession | YP_560207 |
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| Protein GI | 91785001 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.497284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACGC CGACTTCGTC CGCTCCCACG CCCAGTACTC CTTCCGCCCG CTCGCTCACG
GTAATGCTGT GGGTCGTCGC TACCGGCTTC TTCATGCAGA CGCTCGACTC GACCATCGTC
AACACCGCGC TCCCCGCGAT GGCGACGAGC CTCGGCGAAT TGCCGCTGCG CATGCAATCG
GTGGTGATCG CCTATTCGCT GACGATGGCC GTGATGATCC CGGTATCCGG CTGGCTCGCC
GACAAGCTCG GCACACGCCG CGTGTTCTTC AGCGCGATCC TGGTGTTCGC AGTCGCCTCG
TTGCTGTGCG CGAACGCGCA CACCCTGAAT CAGCTCGTGG CTTTCCGCAT CATGCAAGGC
GTGGGCGGCG CGATGCTGTT GCCGGTTGGA CGGCTCGCGG TACTGCGCAC CTTTCCGGCA
GAACGCTATT TGCCGGCGCT CTCGTTCGTG GCGATCCCCG GTCTGATCGG ACCGCTGATC
GGCCCCACGC TCGGCGGCTG GCTCGTGAAG ATCGCCTCGT GGCACTGGAT CTTTCTGATC
AACGTGCCGG TGGGCATAGT CGGGTGCATT GCCACGTTCA TCTTCATGCC GGATAGCCGC
AACGAGCACG TCGGCAAGTT CGATATGAAA GGCTACCTGC TGCTGATCCT GGGCATGGTG
GCAATTTCGT TCGCACTCGA CGGCCGCACC GAATTCGGCA TTCAGCACGC CACGGTGCTG
GTGCTGCTGA TCCTGAGCCT TGCCTGCTTT GTTGCCTACG GCTTGCACGC CGTGCGCGAG
CCCTCGCCGA TTTTCTCGCT AGACCTCTTC AAGATCCACA CCTTCAGCGT GGGCCTGCTC
GGCAATCTGT TCGCACGGAT CGGCAGTGGC GCAATGCCTT ATCTGATTCC TCTGCTATTG
CAGGTGAGTC TCGGCTATAG CGCCTTCGAA GCCGGCCTGA TGATGCTGCC GGTGGCGGCC
GCGGGCATGG CGTCCAAACG TCTCGTGACG ACGCTGATCA TCAAGTACAG CTACCGGCGC
GTGCTGATCA TCAACACGGT GCTGGTCGGC CTGACGATGG CAAGCTTCGC GCTCACCGCC
GCGAATCAGC CGCTGTGGCT GCGGCTCGTG CAACTGGCAC TTTTCGGCGG CGCCAACTCG
ATTCAGTTCA CGGCAATGAA CACGTTGACA CTCAAGGACC TGGGCACCGG TGGAGCGAGC
AGCGGCAACA GCCTGTTTTC GCTGGTCCAG ATGCTGTCGA TGAGTCTCGG CGTGACGGTA
GCCGGCGCCC TGCTCGCCAC CTTCACCGGC CTGCTGCCGC GTGTGACGGC CGCCAATTCG
CTGCCCGCAT TTCACGCGAC TTTCCTGTGT GTCGGCATCA TTACGGCAGG CTCTTCGTGG
ATCTTTGCGC AACTGTCGCC GGACATCCGC ACACCCGCGA AAAAGACCGA TCCCTCCGAA
CGCACCTGA
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| Protein sequence | MSTPTSSAPT PSTPSARSLT VMLWVVATGF FMQTLDSTIV NTALPAMATS LGELPLRMQS
VVIAYSLTMA VMIPVSGWLA DKLGTRRVFF SAILVFAVAS LLCANAHTLN QLVAFRIMQG
VGGAMLLPVG RLAVLRTFPA ERYLPALSFV AIPGLIGPLI GPTLGGWLVK IASWHWIFLI
NVPVGIVGCI ATFIFMPDSR NEHVGKFDMK GYLLLILGMV AISFALDGRT EFGIQHATVL
VLLILSLACF VAYGLHAVRE PSPIFSLDLF KIHTFSVGLL GNLFARIGSG AMPYLIPLLL
QVSLGYSAFE AGLMMLPVAA AGMASKRLVT TLIIKYSYRR VLIINTVLVG LTMASFALTA
ANQPLWLRLV QLALFGGANS IQFTAMNTLT LKDLGTGGAS SGNSLFSLVQ MLSMSLGVTV
AGALLATFTG LLPRVTAANS LPAFHATFLC VGIITAGSSW IFAQLSPDIR TPAKKTDPSE
RT
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