| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0777 |
|---|
| Symbol | |
|---|
| ID | 4005614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 4022933 |
|---|
| End bp | 4023943 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637948853 |
|---|
| Product | sigma-24 (FecI) |
|---|
| Protein accession | YP_560209 |
|---|
| Protein GI | 91785003 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.234791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAAC AGGCAATCGA GAAGGCATCC AGCTTCGAGG CAGTGCGCGC CCGCCTGCTC
GCGCTGGCGT ACCGGATGCT CGGCAGCCGC GCCGAAGCAG AAGACGTGGT GCAGGACGTC
GGCCTGAAAT GGCACCTCGC GGACACGCAG GAGGTGCAGA CACCGGCCGC CTGGCTTACT
ACGATCACCA CGCGCGCGGC GATCGACCGG CTGCGTCACG TGCAGCGCGA ACGCGCATCG
CAAGCCACCG GCTGGTTGCC GGAACCGTGG CTCGACGAGG TCGCGCCATC GGCTGAGGAA
CTGGCCTTGC GCGCGGCGGA GATGTCCTAC GGCGTGATGC TGCTGCTCGA GCGGCTGAAA
CCCGACGAAC GGGCGGCATT CGTGCTGCAC GAAGCCTTCG ACTGTGATTA CGCCGAGGTC
GCGGCGATTC TCGAGCGCAC GCCGGCCGCC TGCCGGCAGA TCGTCCATCG GGCCAAAGCG
CGTCTGCAAC GGGCGGGCGC GCCGGTAGAG CGGCCCGACC CGGCCGCGCA TGCGCGGATC
GTGGAACGGT TGCGCACGGC GCTGGAGGCG CAGGATCGAG CCGGCTTGCT GCGGCTCTTC
AGTGACGCGC CGGAAGTCGT CAGCGACGCG CCTTTGTGCA CGCCGGTGAG CACGCCGGTG
AGCACGCCGG TGAGCACGCC GGAACCGGCA ATGGCCGGGT GGATGGATAC CGTAACGTCG
CTGGTCGAGC ATGCCAGCAA CGCCGAGACG GTATCGGTCG CGGGCACGTT GTGTGTCGCC
TTGCTCTTCG AGGGCGAGGT AATCGGCGTC CTCGACATAT CCACGAACAG CTTCGCGGAT
GGCTCCGCAA AGATCGTCGC CATGCGCGTG GTGACCAGTT CGGCGCGCTT GCGGGCCACC
AACCGCATGC TGGGCCGCGC CGCAGTCAGG CAACTGCTTG CGCGGATCCA GCAGAGTGCC
GTGACATCAA TTCCGGTGGG CCGCGACTTC CCAGTTGATG TCCACGCATA G
|
|---|
| Protein sequence | MTEQAIEKAS SFEAVRARLL ALAYRMLGSR AEAEDVVQDV GLKWHLADTQ EVQTPAAWLT
TITTRAAIDR LRHVQRERAS QATGWLPEPW LDEVAPSAEE LALRAAEMSY GVMLLLERLK
PDERAAFVLH EAFDCDYAEV AAILERTPAA CRQIVHRAKA RLQRAGAPVE RPDPAAHARI
VERLRTALEA QDRAGLLRLF SDAPEVVSDA PLCTPVSTPV STPVSTPEPA MAGWMDTVTS
LVEHASNAET VSVAGTLCVA LLFEGEVIGV LDISTNSFAD GSAKIVAMRV VTSSARLRAT
NRMLGRAAVR QLLARIQQSA VTSIPVGRDF PVDVHA
|
|---|
| |