| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0720 |
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| Symbol | |
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| ID | 4005690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 4085278 |
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| End bp | 4086600 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637948910 |
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| Product | ABC sugar transporter, periplasmic ligand binding protein |
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| Protein accession | YP_560266 |
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| Protein GI | 91785060 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000241977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCAG CCCTCAAATC CACGCTAAAG GCGGTCAGTG CCGGCGCTGT CGCATGCTTT
GCATTGAACG CGTCGGCGGC CACGGTGACG ATCGCCACGC TGAACAATCC GGACATGATC
GAGCTGAAGA AGCTCTCGCC CGAATTCGAA AAGGCGAATC CGGACATCAA GCTGAACTGG
GTGATTCTCG AAGAAAACGT GCTGCGTCAG CGCGCCACCA CCGACATCAC GACCGGCAGC
GGCCAGTTCG ACGTGATGAC GATCGGCGCG TACGAAACGC CGCAATGGGG CAAGCGTGGC
TGGCTCACGC CGCTCACCAA TCTGCCCGCC GATTACGATC TGAACGACGT CGTGAAGACC
GCCCGCGATG GCCTCTCTAG CGGCGGCCAG TTGTATGCGC TGCCGTTCTA CGTCGAAAGC
TCGATGACGT ATTACCGCAA AGACCTGTTC GCGGCCAAAG GTCTGAAGAT GCCCGATCAG
CCCACTTACG ACCAGATCGC GCAATTCGCC GACAAGCTTA CCGACAAGGC CAACGGCATT
TACGGCATCT GCCTGCGCGG CAAGGCGGGC TGGGGCGAGA ACATGGCTTA CGGCACGACG
GTGGTGAATA CCTTCGGCGG CCGCTGGTTC GACGAGAAGT GGAACGCGCA GCTCACCTCG
CCGGAATGGA AGAAGGCGAT CACCTTCTAC GTCAACCTGC TGAAGAAAGA CGGCCCTCCG
GGAGCGAGCT CGAACGGCTT CAACGAGAAT CTCACGCTGA TGTCGTCCGG CAAGTGCGCG
ATGTGGATCG ACGCGACGGT CGCGGCCGGC ATGCTCTACA ACAAGCAGCA ATCGCAGATC
GCCGACAAGG TGGGGTTTGC CGCGGCGCCG ATCGCGGTCA CGCCGAAGGG ATCGCACTGG
CTATGGGCCT GGGCGCTGGC GATTCCGAAA TCGTCGAAGC AGACCGACGC GGCGAAGAAG
TTCATTACGT GGGCCACGTC GAAGCAGTAC ATTGAACTGG TCGCGAAGGA CGAAGGCTGG
GCCTCGGTGC CGCCGGGAAC GCGTCAATCC ACGTACGCTC GCCCCGAGTA CAAGCAAGCC
GCGCCGTTCG GCGACTTCGT GCTGAAGGCG ATCGAAACGG CAGATCCGGA TCATCCGACG
CTCAAGCCGG TGCCGTACAC CGGTGTGCAG TTCGTCGGGA TTCCTGAGTT CCAGTCGTTC
GGCACGGTGG TCGGTCAGAG CATCTCCGGT GCGATTGCCG GTCAGATGAC GGTCGACCAG
GCGCTGGCAG CGGGCAACGC CACGGCGGAT CGTGCGGTGA AGCAGGCCGG CTACCAGAAG
TAA
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| Protein sequence | MKPALKSTLK AVSAGAVACF ALNASAATVT IATLNNPDMI ELKKLSPEFE KANPDIKLNW
VILEENVLRQ RATTDITTGS GQFDVMTIGA YETPQWGKRG WLTPLTNLPA DYDLNDVVKT
ARDGLSSGGQ LYALPFYVES SMTYYRKDLF AAKGLKMPDQ PTYDQIAQFA DKLTDKANGI
YGICLRGKAG WGENMAYGTT VVNTFGGRWF DEKWNAQLTS PEWKKAITFY VNLLKKDGPP
GASSNGFNEN LTLMSSGKCA MWIDATVAAG MLYNKQQSQI ADKVGFAAAP IAVTPKGSHW
LWAWALAIPK SSKQTDAAKK FITWATSKQY IELVAKDEGW ASVPPGTRQS TYARPEYKQA
APFGDFVLKA IETADPDHPT LKPVPYTGVQ FVGIPEFQSF GTVVGQSISG AIAGQMTVDQ
ALAAGNATAD RAVKQAGYQK
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