Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A0332 |
Symbol | rpmD |
ID | 4006086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 4505550 |
End bp | 4505732 |
Gene Length | 183 bp |
Protein Length | 60 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637949305 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_560653 |
Protein GI | 91785447 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.00936849 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00323406 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCTGATA AAACTGTCAA GGTCCAGCTC GTCAAGAGCC TGATCGGCAC CCGTGAAACG CACCGTGCGA CGGTGCGTGG CTTGGGTCTG CGCCGACTCA ACTCGGTTAG CGAGTTGCAG GACACGCCGG CCGTGCGCGG CATGATCAAC AAGGTTTCGT ACCTCGTTAA GGTCATCAGC TAA
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Protein sequence | MSDKTVKVQL VKSLIGTRET HRATVRGLGL RRLNSVSELQ DTPAVRGMIN KVSYLVKVIS
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