Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A0317 |
Symbol | rplB |
ID | 4006101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 4511797 |
End bp | 4512624 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637949320 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_560668 |
Protein GI | 91785462 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0000380441 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00287275 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCAATCG TTAAAGTTAA GCCGACTTCG CCGGGTCGCC GTGCGATGGT CAAGGTGGTC AACAAGGATC TGCATAAGGG CAAGCCGTTC GCACCGCTGC TCGACTCGCA ATCCACGACC GCCGGCCGTA ACAACAACGG CCACATCACG ACCCGTCATA AGGGTGGTGG TCACAAGCAT CACTATCGTG TCGTCGATTT CCGTCGCAAT AAGGACGGTA TCGCAGCGAA GGTCGAACGT CTCGAGTACG ACCCGAACCG TAGCGCGAAC ATTGCGCTGG TTCTGTACGC AGACGGCGAA CGTCGCTACA TCATTGCTCC GAAGGGTGTC ACCGTCGGCC AGCAACTGAT GTCGGGTTCG GAAGCGCCGA TCCGCGCTGG CAACACGCTG CCGATCCGCA ACATCCCGGT CGGTACGACG ATCCACTGCA TCGAAATGCT GCCGGGCAAG GGCGCGCAAA TGGCGCGTTC GGCTGGTACG TCGGCGATGC TGCTGGCTCG TGAAGGTATC TACGCACAGG TCCGCCTGCG CTCGGGTGAA ATCCGCCGCG TCCACGTTGA GTGCCGCGCG ACAATCGGTG AAGTTGGCAA CGAAGAGCAC AGCCTCCGTC AAATCGGTAA GGCTGGCGCA AACCGCTGGC GCGGTATCCG CCCGACGGTG CGTGGCGTTG CAATGAACCC GGTCGATCAC CCGCACGGTG GTGGTGAAGG CAAGACGGCT GCAGGTCGTG ATCCGGTGAG CCCGTGGGGC ACGCCTACTA AGGGTTATCG CACCCGCAGC AACAAGCGCA CGACGAGCAT GATCGTCCAG CGCCGTCACA AGCGTTAA
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Protein sequence | MAIVKVKPTS PGRRAMVKVV NKDLHKGKPF APLLDSQSTT AGRNNNGHIT TRHKGGGHKH HYRVVDFRRN KDGIAAKVER LEYDPNRSAN IALVLYADGE RRYIIAPKGV TVGQQLMSGS EAPIRAGNTL PIRNIPVGTT IHCIEMLPGK GAQMARSAGT SAMLLAREGI YAQVRLRSGE IRRVHVECRA TIGEVGNEEH SLRQIGKAGA NRWRGIRPTV RGVAMNPVDH PHGGGEGKTA AGRDPVSPWG TPTKGYRTRS NKRTTSMIVQ RRHKR
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