| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0307 |
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| Symbol | |
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| ID | 4006111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 4521677 |
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| End bp | 4525915 |
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| Gene Length | 4239 bp |
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| Protein Length | 1412 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637949330 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_560678 |
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| Protein GI | 91785472 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.188018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTC TGCTCGATCT ATTCAAGCAA GTCCAACAGC CTGAAGTTTT TGACGCGATC
AAGATCGGTC TGGCTTCGCC GGACAAGATC CGTTCGTGGT CGTTCGGTGA AGTGAAGAAG
CCGGAAACCA TCAACTACCG GACGTTCAAG CCGGAACGCG ATGGTTTGTT CTGCGCGAAG
ATCTTCGGGC CGATCAAAGA CTACGAATGT CTTTGCGGTA AGTACAAGCG CCTGAAGCAT
CGTGGCGTGA TCTGCGAGAA GTGCGGCGTC GAAGTGACGC TGGCGAAAGT GCGTCGCGAA
CGCATGGGCC ACATCGAACT GGCCTCGCCG GTTGCGCACA TCTGGTTTTT GAAGTCGCTG
CCGTCGCGTC TGGGCATGGT GCTCGACATG ACGCTGCGCG ATATCGAACG CGTGCTGTAT
TTCGAAGCAT ACGTGGTGAT CGATCCGGGC ATGACGCCGC TGAAAGCGCG GCAGATCATG
ACGGAAGAGG ATTACTACAA CAAGGTCGAA GAATACGGTG ACGAATTCCG TGCCGAGATG
GGCGCGGAAG GCGTGCGCGA GCTGCTGCGC GCGATCAACA TCGACGAACA GGTCGAGATG
CTGCGCACCG AACTCAAGAA CACGGGTTCG GAAGCGAAGA TCAAGAAGTA CGCGAAGCGC
CTGAAGGTGC TCGAGGCTTT CCAGCGTTCG GGCATCAAGC CTGACTGGAT GGTGCTCGAA
GTGCTGCCGG TGCTGCCGCC GGAACTGCGT CCGCTGGTGC CGCTCGACGG CGGCCGCTTC
GCGACGTCGG ACCTGAACGA CCTGTATCGC CGCGTGATCA ACCGTAACAA CCGGTTGAAG
CGTCTGCTCG AACTGAAGGC GCCTGAAATC ATCGTCCGCA ACGAAAAGCG GATGCTGCAG
GAAGCCGTCG ATTCGCTGCT CGACAACGGT CGCCGCGGTA AGGCCATGAC CGGCGCGAAC
AAGCGTCCGC TGAAGTCGCT CGCTGACATG ATCAAGGGTA AGGGCGGTCG TTTCCGTCAG
AACCTGCTTG GTAAGCGCGT CGACTATTCG GGCCGTTCGG TGATCGTGGT CGGCCCGACG
CTCAAGCTGC ATCAGTGCGG TCTGCCGAAG CTGATGGCGC TCGAACTGTT CAAGCCGTTC
ATCTTCAACA AGCTCGAAGT GATGGGTGTC GCTACCACCA TCAAGGCCGC GAAGAAGGAA
GTCGAGAACC AGACGCCGGT GGTGTGGGAC ATTCTCGAAG AAGTCATTCG TGAACATCCG
GTCATGCTGA ACCGTGCGCC TACGCTTCAC CGTCTCGGCA TTCAGGCTTT CGAGCCGGTG
CTGATCGAAG GTAAGGCTAT CCAGTTGCAT CCGCTCGTTT GCGCGGCGTT CAACGCCGAC
TTCGACGGTG ACCAGATGGC TGTTCACGTG CCGCTGTCGC TGGAAGCGCA GATGGAAGCG
CGTACGTTGA TGCTGGCGTC GAACAACATT CTGTTCCCGG CCAACGGCGA TCCGTCGATC
GTGCCGTCGC AGGATATCGT GCTCGGTCTG TACTACGCGA CCCGTGAAGC AGTGAACGCC
AAGGGCGAAG GTCTGACGTT CACCGGCGTT TCGGAAGCGT TGCGTGCGTA CGAGAACAAG
GAAGTCGAGC TGGCCTCGCG CGTCAACGTG CGGATCACGG AAATGGTCCA TAACGAAGAC
AAGTCGGACG GTGCGCCGGC GTTCGTGCCG AAGATCTCGC TGTACGCGAC CACCGTCGGC
CGCGCAATCC TGTCGGAAAT CCTTCCGCCG GGCCTGCCGT TTTCGGTGCT CAACAAGCCG
CTGAAGAAGA AGGAAATCTC GCGCCTCATC AACACCGCAT TCCGCAAGTG CGGTCTGCGT
GAAACGGTGA TTTTCGCCGA CCAGTTGATG CAGTCGGGTT TCCGTCTGGC AACGCGCGCT
GGTATCTCGA TCTGCGTCGA CGACATGCTC GTGCCGCCGC AGAAGGAAAC CATCGTTGGC
GACGCCGCGA AGAAGGTGAA GGAATACGAC CGTCAGTACA TGTCGGGTCT CGTCACGTCG
CAAGAGCGCT ACAACAACGT GGTCGACATC TGGTCGGCAA CGTCGGAAGC GGTCGGCAAG
GCGATGATGG AACAGTTGTC GACGGAACCG GTCACGGATC GCGACGGCAA CGAAACGCGT
CAGGAATCGT TCAACTCGAT TTACATGATG GCGGACTCGG GTGCTCGTGG TTCCGCGGTT
CAGATTCGTC AGCTGGCCGG TATGCGTGGC CTGATGGCGA AGCCGGACGG CTCGATCATC
GAGACGCCGA TTACGGCGAA CTTCCGTGAA GGCCTGAACG TGTTGCAGTA CTTCATCTCG
ACCCACGGCG CACGTAAGGG TCTGGCTGAT ACGGCACTGA AGACGGCGAA CTCGGGTTAC
CTGACGCGTC GTCTCGTGGA CGTGACGCAG GATCTGGTGG TGGTCGAGGA CGATTGCGGT
ACGTCCAACG GCGTTGCCAT GAAGGCGTTG GTCGAAGGCG GTGAAGTCGT CGAAGCGCTG
CGTGACCGTA TTCTCGGTCG CGTGACGGTG GCTGACGTCG TCAATCCGGA ATCGCAGGAA
ACCCTGTACG AAACGGGCAC GTTGCTCGAC GAAGATGCGG TCGAAGAAAT CGAACGCCTC
GGCATCGACG AAGTGCGCGT GCGTACGCCG CTGACTTGCG AGACGCGTTA CGGTCTGTGC
GCAGCCTGCT ACGGCCGCGA CCTGGGCCGC GGCTCGTCGG TCAACGTCGG TGAAGCAGTC
GGCGTGATCG CTGCTCAGTC GATCGGTGAA CCGGGCACGC AGCTTACGAT GCGTACGTTC
CACATCGGTG GTGCGGCATC GCGTGCGGCA GTGGCTTCGT CGGTTGAAGC GAAGTCGAAC
GGTACGGTGC GTTTCACCGC AACCATGCGT TACGTCACCA ACGCGAAGGG CGAGCAGATC
GTCATCTCGC GTTCGGGCGA AGCGATGATC ACCGACGACC ACGGTCGCGA GCGCGAACGT
CACAAGGTGC CGTACGGCGC GACGCTGTTG CAACTGGACG GCGCGCAGAT CAAGGCCGGC
ACGCAACTGG CCACGTGGGA CCCGATGACG CGTCCGATCA TCACCGAGTA CGGTGGTACG
GTGAAGTTCG AAAACGTCGA AGAAGGCGTG ACGGTTGCCA AGCAGATCGA CGACGTGACG
GGTCTGTCCA CGCTGGTCGT GATCGACGTG AAGCGTCGTG GTTCGCAAGC GTCGAAGACG
GTGCGTCCGC AGGTCAAGCT GCTCGATGCG AACGGCGAAG AAGTCAAGAT CCCGAACACC
GAGCACTCGG TGCAGATCGG CTTCCAGGTC GGCGCTCTGA TCACCGTGAA GGATGGTCAG
CAAGTGCAGG TCGGTGAAGT GCTCGCACGG ATCCCGACTG AATCGCAGAA GACGCGTGAC
ATTACCGGCG GTCTGCCGCG TGTGGCGGAA CTGTTCGAAG CACGTTCGCC GAAGGACGCA
GGTATCCTGG CGGAAGTCAC GGGTACGACG TCGTTCGGTA AGGACACGAA GGGCAAGCAG
CGTCTCGTTA TCACGGACCT CGAGGGCAAC CAGCACGAGT TCCTGATCGC GAAGGAAAAG
CAGGTTCTGG TGCACGATGG TCAGGTCGTC AACAAGGGCG AAATGATCGT CGACGGGCCG
GCGGATCCGC ACGACATTCT GCGTTTGCAG GGCGTCGAAG CGCTGTCGCG TTACATCGTG
GACGAAGTGC AGGACGTGTA CCGTCTGCAA GGCGTGAAGA TCAACGACAA GCACATTGAA
GTGATTGTTC GTCAGATGCT GCGCCGCGTG CAGATTACGG ACAACGGCGA TACGCGTTTC
ATCCCGGGCG AACAGGTCGA GCGGTCGGAT ATGCTCGACG AGAACGACCG TATGATCGCG
GAAGACAAGC GTCCGGCAAC GTACGAAAAC GTGCTGCTCG GTATCACGAA GGCCTCGTTG
TCGACCGATT CGTTCATCTC GGCGGCGTCG TTCCAGGAAA CGACGCGCGT GCTGACCGAA
GCGGCGATCA TGGGCAAGCG CGACGACCTG CGTGGTCTGA AGGAAAACGT GATCGTCGGC
CGTCTGATTC CGGCCGGTAC GGGTCTCGCG TTCCACAAGG CACGCAAGAG CAAGGAACTG
TCCGACCGCG AGCGTTTCGA TCAGATCGCA GCGGAAGAGT CGTTCGAATT CGGTACGCCG
GAAACTCCGG CCGCCGAACA GCAGCACTCA GGCGAGTAA
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| Protein sequence | MKALLDLFKQ VQQPEVFDAI KIGLASPDKI RSWSFGEVKK PETINYRTFK PERDGLFCAK
IFGPIKDYEC LCGKYKRLKH RGVICEKCGV EVTLAKVRRE RMGHIELASP VAHIWFLKSL
PSRLGMVLDM TLRDIERVLY FEAYVVIDPG MTPLKARQIM TEEDYYNKVE EYGDEFRAEM
GAEGVRELLR AINIDEQVEM LRTELKNTGS EAKIKKYAKR LKVLEAFQRS GIKPDWMVLE
VLPVLPPELR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLLELKAPEI IVRNEKRMLQ
EAVDSLLDNG RRGKAMTGAN KRPLKSLADM IKGKGGRFRQ NLLGKRVDYS GRSVIVVGPT
LKLHQCGLPK LMALELFKPF IFNKLEVMGV ATTIKAAKKE VENQTPVVWD ILEEVIREHP
VMLNRAPTLH RLGIQAFEPV LIEGKAIQLH PLVCAAFNAD FDGDQMAVHV PLSLEAQMEA
RTLMLASNNI LFPANGDPSI VPSQDIVLGL YYATREAVNA KGEGLTFTGV SEALRAYENK
EVELASRVNV RITEMVHNED KSDGAPAFVP KISLYATTVG RAILSEILPP GLPFSVLNKP
LKKKEISRLI NTAFRKCGLR ETVIFADQLM QSGFRLATRA GISICVDDML VPPQKETIVG
DAAKKVKEYD RQYMSGLVTS QERYNNVVDI WSATSEAVGK AMMEQLSTEP VTDRDGNETR
QESFNSIYMM ADSGARGSAV QIRQLAGMRG LMAKPDGSII ETPITANFRE GLNVLQYFIS
THGARKGLAD TALKTANSGY LTRRLVDVTQ DLVVVEDDCG TSNGVAMKAL VEGGEVVEAL
RDRILGRVTV ADVVNPESQE TLYETGTLLD EDAVEEIERL GIDEVRVRTP LTCETRYGLC
AACYGRDLGR GSSVNVGEAV GVIAAQSIGE PGTQLTMRTF HIGGAASRAA VASSVEAKSN
GTVRFTATMR YVTNAKGEQI VISRSGEAMI TDDHGRERER HKVPYGATLL QLDGAQIKAG
TQLATWDPMT RPIITEYGGT VKFENVEEGV TVAKQIDDVT GLSTLVVIDV KRRGSQASKT
VRPQVKLLDA NGEEVKIPNT EHSVQIGFQV GALITVKDGQ QVQVGEVLAR IPTESQKTRD
ITGGLPRVAE LFEARSPKDA GILAEVTGTT SFGKDTKGKQ RLVITDLEGN QHEFLIAKEK
QVLVHDGQVV NKGEMIVDGP ADPHDILRLQ GVEALSRYIV DEVQDVYRLQ GVKINDKHIE
VIVRQMLRRV QITDNGDTRF IPGEQVERSD MLDENDRMIA EDKRPATYEN VLLGITKASL
STDSFISAAS FQETTRVLTE AAIMGKRDDL RGLKENVIVG RLIPAGTGLA FHKARKSKEL
SDRERFDQIA AEESFEFGTP ETPAAEQQHS GE
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