Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A0054 |
Symbol | |
ID | 4006373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 4781846 |
End bp | 4784782 |
Gene Length | 2937 bp |
Protein Length | 978 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637949587 |
Product | glycine dehydrogenase |
Protein accession | YP_560925 |
Protein GI | 91785719 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCTCG AACACCCGGA TCGTCTGATG AACCGCACTC CTCTCTCGCT CGCCGCGCTC GAAGTGCATG ACGCCTTCGC CGAACGGCAC ATCGGCCCGG ATTCGGCCGA CCAGCAAGCG ATGCTCGAAG CCCTCGGCTT CGCGTCGCGC GCCGCGCTGA TCGACGCCGT CATTCCGAAG ACGATCCGCC GCACCGAACC GCTGCCGCTC GGCCCCTTCG CGCAACCGAA AAGCGAAGCC GAAGCGCTCG CCACGCTGCG CGAGCTCGCG GACAGGAACC AGGTGTTCCG CTCGTACATC GGCCAGGGCT ATTACAACGC GCACACGCCG ACGGTGATCC TGCGTAACGT GCTGGAAAAT CCGGCGTGGT ACACCGCGTA CACGCCGTAC CAGCCAGAAA TTTCGCAAGG CCGTCTGGAA GCGCTACTGA ACTTCCAGCA GATGATCGTC GACCTGACGG GTCTGGCGAT CTCGAATGCG TCGCTGCTCG ACGAAGCCAC GGCCGCGGCC GAGGCGATGA CGCTGCTGCA ACGCATCGGC AAGCCGAAGT CGAACGTGTT CTATGTGGCC GACGACGTGC TGCCGCAAAC CATCGAAGTG GTGAAGACGC GCGCCACGCC GGTGGGCATT GAAGTGAAAG TGGGCCCGGC TGCGGACGCG GCGAACGCGA ACGCGTTCGG CGTACTGCTG CAATACCCGG GCGTGAACGG CGACGTGCGC GACTACCGCG CCCTGGCCGA AGCGATCCAC GCCGCGGGCG GCCACGTGGT GGTCGCCGCC GACCTGCTCG CGCTGACCGT CCTCACGCCG CCGGGCGAAT GGGGCGCGGA CGTGGCCGTC GGCAACACGC AGCGCTTCGG CGTGCCGGTC GGCTTCGGCG GCCCGCATGC GGCTTACCTC GCCGTGCGCG ACGAATTCAA GCGCCAGATG CCGGGCCGCC TCGTCGGCGT GACCGTCGAC GCGCAAGGCA ACCCCGCGCT GCGTCTCGCG CTGCAAACGC GCGAACAGCA TATCCGCCGC GAGAAGGCCA CCTCGAACGT ATGTACCGCG CAAGCATTGC TCGCGATCAT GGCCAGCATG TACGCCGTGT ATCACGGCCC GCACGGCCTG AAAACGATCG CGCTGCGCGT GAACCGGATC GCCGCGCTGC TGGCAGAAGG TGCGAAGCAA CTCGGCTACA CGCTCGTCAA CGAAACGTTC TTCGACACGC TCACATTCGA AACCGGCGCG CGCACGCAAG CGCTGCATGA CGCCGCGCTT GCGAAGCGCA TCAACCTGCG CCGCGTGAGC GACACGCAAG TGGGCCTGTC GGTCGACGAA ACCACCACGC GCCGCGATCT GGCCGATCTG CTCGAAGTGT TCGCACAAGC CGCGGGCGCC AAAATCGTGC CGCAAGTGGA CGCGCTCGAC TCGACCATCG CCGCATCGGA TACGGCATCG GTGCCGCCCG CGCTCGAGCG CACCAGCGCG TATCTCACGC ACCACGTATT CAACCGCCAT CATTCGGAAA CGGAAATGCT GCGCTATCTG CGCAGCCTGT CGGACAAAGA CCTCGCGCTC GACCGCTCGA TGATCCCGCT CGGCTCGTGC ACGATGAAGC TGAACGCGAC CTCGGAAATG CTGCCGGTCA CGTGGCCTGA ATTCGGCCAG ATCCATCCGT TCGCGCCGGC CGAGCAAACC GTCGGCTATC GCGAAATGAT CGATCAGCTC GAAGCGATGC TGGTCGCGGC CACCGGCTAC GCTGCCGTGT CGCTGCAACC GAATGCCGGC TCGCAAGGCG AGTACGCGGG CCTGTTGATC ATTCACGCGT ATCACGCGTC GCGTGGCGAA GCGCATCGCA ATGTCTGCCT GATTCCCGCT TCGGCGCACG GCACGAACCC GGCCTCGGCA CACATGGCCG GCATGCAGGT GATCGTGGTG GCGTGCGACG CGCAAGGCAA CGTCGATATC GAAGACCTGA AGAAAAAGGC CGAACAGCAC GCCGACAAAC TCGCGGCGAT CATGATCACG TATCCTTCCA CGCACGGCGT GTTCGAGCAG AACGTGCGCG AAATCTGCGA GATCGTGCAT GCGCACGGCG GTCAGGTCTA CGTGGACGGC GCGAACATGA ACGCGATGGT CGGCCTCACT GCGCCGGGCC AGTTCGGCGG CGACGTGTCG CACCTGAATC TGCACAAGAC GTTCTGCATT CCGCACGGCG GCGGCGGACC GGGCGTCGGT CCGGTCGCGG TCGGCGCGCA TCTCGCGCAG TTCCTGCCGA ATCAGATCTC GTCGGGCTAC GAACGCGCGC CGAACGGTAT CGGCGCCGTG TCGGGCGCAC CGTACGGCTC GGCGTCTATC CTGCCGATCT CGTGGATGTA TATCGCGATG ATGGGCGCGA AGAACCTCAC CGCCGCGACC GAAACCGCGA TCCTCAACGC GAACTACGTC GCGAAGAAAC TCGCGCCGCA CTATCCGGTG CTGTATTCGG GCCCGGGCGG ACTGGTCGCG CACGAGTGCA TTCTCGACCT GCGCCCGATC AAGGAAACCA GCGGCATTAC CGTCGACGAC GTCGCCAAGC GTCTCGCCGA CTACGGCTTC CATGCGCCGA CCATGAGCTT CCCGGTGCCG GGCACGCTGA TGGTCGAGCC GACCGAATCG GAATCGAAGG AAGAACTCGA CCGTTTCATC GAAGCGATGA TCGCGATCCG CGAGGAAATC CGCGCAGTCG AAGAAGGCCG CTCGGACCGC GAGGACAATC CGCTGAAGCA TGCACCGCAT ACGGCGGCGG TGGTCATCGC GAATGACTGG AAGCATGCGT ATGCGCGCGA AACCGCGGCG TATCCGCTGC CCACGCTGAT CGCGAAAAAA TACTGGCCGC CGGTCGGCCG CGCGGACAAC GTGTACGGCG ACCGCAATCT GTTCTGCTCC TGCGTGCCGA TCGCCGATTA CGAGTAA
|
Protein sequence | MKLEHPDRLM NRTPLSLAAL EVHDAFAERH IGPDSADQQA MLEALGFASR AALIDAVIPK TIRRTEPLPL GPFAQPKSEA EALATLRELA DRNQVFRSYI GQGYYNAHTP TVILRNVLEN PAWYTAYTPY QPEISQGRLE ALLNFQQMIV DLTGLAISNA SLLDEATAAA EAMTLLQRIG KPKSNVFYVA DDVLPQTIEV VKTRATPVGI EVKVGPAADA ANANAFGVLL QYPGVNGDVR DYRALAEAIH AAGGHVVVAA DLLALTVLTP PGEWGADVAV GNTQRFGVPV GFGGPHAAYL AVRDEFKRQM PGRLVGVTVD AQGNPALRLA LQTREQHIRR EKATSNVCTA QALLAIMASM YAVYHGPHGL KTIALRVNRI AALLAEGAKQ LGYTLVNETF FDTLTFETGA RTQALHDAAL AKRINLRRVS DTQVGLSVDE TTTRRDLADL LEVFAQAAGA KIVPQVDALD STIAASDTAS VPPALERTSA YLTHHVFNRH HSETEMLRYL RSLSDKDLAL DRSMIPLGSC TMKLNATSEM LPVTWPEFGQ IHPFAPAEQT VGYREMIDQL EAMLVAATGY AAVSLQPNAG SQGEYAGLLI IHAYHASRGE AHRNVCLIPA SAHGTNPASA HMAGMQVIVV ACDAQGNVDI EDLKKKAEQH ADKLAAIMIT YPSTHGVFEQ NVREICEIVH AHGGQVYVDG ANMNAMVGLT APGQFGGDVS HLNLHKTFCI PHGGGGPGVG PVAVGAHLAQ FLPNQISSGY ERAPNGIGAV SGAPYGSASI LPISWMYIAM MGAKNLTAAT ETAILNANYV AKKLAPHYPV LYSGPGGLVA HECILDLRPI KETSGITVDD VAKRLADYGF HAPTMSFPVP GTLMVEPTES ESKEELDRFI EAMIAIREEI RAVEEGRSDR EDNPLKHAPH TAAVVIANDW KHAYARETAA YPLPTLIAKK YWPPVGRADN VYGDRNLFCS CVPIADYE
|
| |