Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A0052 |
Symbol | |
ID | 4006375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 4786082 |
End bp | 4787470 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637949589 |
Product | L-serine ammonia-lyase |
Protein accession | YP_560927 |
Protein GI | 91785721 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTCA GCGTGTTCGA CCTCTTCAAA ATCGGCATTG GTCCGTCCAG TTCGCATACG GTCGGGCCGA TGCGCGCGGC GCTGATGTTC GCTCAAGGGC TCGAACGCGA TGGGCTGCTC ACTGCGACCG CATCGGTGAA GGTGGAGCTG TATGGCTCGC TCGGCGCGAC GGGCAAGGGG CACGGTACCG ATCGCGGTGT GATGCTTGGC CTGATGGGCG ACGCACCCGA CACCGTGAAT CCGGACACGA TCGCCGAGCG GCTGGAAGGC GTGCGCGTGT CCCGCAAGCT GGCGCTGCTC GGCGCGCATG ACGTGCCATT CGTGCAGAAA GATCAGATTG CGTTCTATCG TCAGGCGCTG CCCGAGCATC CGAACGGTCT CAAGCTGCGC GCTTACGACG CGCAGGGTGA GACATTGCGC GAGTCGACCT ATCTGTCGGT GGGCGGCGGT TTCGTGGTGA CGGCGGGCGC GCCGAACACG AAGGTGCTGA GCGCCGTCGA TCAATTGCCG CACTCGTTTC GCAGCGGCAA CGAGTTGCTT GCGCTGTGCG AATCGACCGA CAAGAGCATC GCCCAGTTGA TGTGGGAAAA CGAGCGCGTC TGGCACACGG AAGAAGAAAC GCGCTCCGGC CTGCTGAAAA TCTGGGACGT GATGCAATCG TGTGTCGCAC GCGGTTGCGG CATCAACAAT CCGGACGCCG ACGGCAACCT GCCCGGCCCG TTCCAGGTGA AGCGCCGTGC GCCGCAGTTG TATCGCGCGC TGTCGGGCAA TCCTGAACTG GCGCTGCGCG ATCCGCTTTC AATGGTCGAC TGGATCAATC TCTACGCGAT CGCCGTCAAC GAAGAAAACG CCGCCGGCGG CCGCGTGGTC ACGGCGCCGA CCAACGGCGC GGCCGGCATC ATCCCGGCAG TGCTGCATTA CTACACGCGC TTCATGCCGG GCTCGAATCA GCAGGGCGTG ATCGACTTCC TGATGACCGC TGCGGCCATC GGCATTCTGT ACAAGCTGAA CGCGTCGATC TCCGGTGCCG AAGTGGGCTG CCAGGGTGAA GTGGGCGTTG CCTGTTCGAT GGCGGCGGGC GCGCTCGCCG CTGTCATGGG CGGCACGCCG CGGCAGGTCG AGAACGCTGC GGAAATCGGC ATGGAACACA ACCTCGGTCT GACGTGCGAC CCGGTCGGCG GCATGGTGCA GATTCCGTGC ATCGAGCGCA ATGCGATGGC GTCGGTGAAG GCGGTCAATG CGGCGCGCAT GGCCTTGCGC GGCGATGGCA GCCACTACGT GTCGCTCGAT TCGGTGATCA AGACCATGCG CGAAACCGGC GCGGATATGA AGACCAAGTA CAAGGAAACG TCGCGCGGCG GGTTGGCGGT GAATATCGTG GAGTGTTGA
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Protein sequence | MAVSVFDLFK IGIGPSSSHT VGPMRAALMF AQGLERDGLL TATASVKVEL YGSLGATGKG HGTDRGVMLG LMGDAPDTVN PDTIAERLEG VRVSRKLALL GAHDVPFVQK DQIAFYRQAL PEHPNGLKLR AYDAQGETLR ESTYLSVGGG FVVTAGAPNT KVLSAVDQLP HSFRSGNELL ALCESTDKSI AQLMWENERV WHTEEETRSG LLKIWDVMQS CVARGCGINN PDADGNLPGP FQVKRRAPQL YRALSGNPEL ALRDPLSMVD WINLYAIAVN EENAAGGRVV TAPTNGAAGI IPAVLHYYTR FMPGSNQQGV IDFLMTAAAI GILYKLNASI SGAEVGCQGE VGVACSMAAG ALAAVMGGTP RQVENAAEIG MEHNLGLTCD PVGGMVQIPC IERNAMASVK AVNAARMALR GDGSHYVSLD SVIKTMRETG ADMKTKYKET SRGGLAVNIV EC
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