| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0049 |
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| Symbol | putA |
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| ID | 4006378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 4790785 |
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| End bp | 4794714 |
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| Gene Length | 3930 bp |
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| Protein Length | 1309 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637949592 |
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| Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_560930 |
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| Protein GI | 91785724 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAGCA CCACCCTTGG CGTCAAGGTC GACGACCTCT TGCGTTCCCG GCTGAAAGAT
GCCGCTACCC GTCTCGAACG CACTCCGCAC TGGCTCATCA AGCAGGCCAT CTTCGCGTAC
CTCGAAAAGA TCGAGCACGG TCAATTGCCG CCCGAGCTGT CGGGTGTGGC GGGCTCGGCC
GATCTGACCG AGGGCGCCGC GGTCGAACAC GAGGAAGACG GTGGGTCGCA CCCGTTCCTC
GATTTCGCGC AAAACGTGCA ACCGCAATCG GTGCTGCGCG CCGCGATCAC GGCCGCTTAC
CGTCGTCCTG AGCCGGAGTG TTTGCCGTTC CTGCTCGGTC AGGCGCGTTT GCCGGCCAAC
CTCGCGGGCG ACGTGCAGAC GATGGCCGGC AAGCTCGTCG AAACGCTGCG CACGAAGAGC
AAGGGCGGTG GCGTCGAAGG TCTGATCCAC GAGTTCTCGC TGTCGAGCCA GGAAGGCGTG
GCGCTGATGT GTCTCGCCGA AGCGCTGCTG CGCATTCCCG ACCGCGCCAC GCGCGACGCG
CTGATCCGCG ACAAGATCAG CAAGGGCGAC TGGAAATCGC ACATGGGCCA GGCGCCGTCG
ATGTTCGTCA ACGCCGCGAC CTGGGGCTTG ATGATCACCG GCAAGCTGGT GACGACCAAC
AGCGAGACGA GCCTCTCGTC GGCGCTCACG CGTCTGATCG GCAAGGGCGG CGAGCCGCTG
ATCCGCAAGG GCGTGGATAT GGCAATGCGC CTGATGGGCG AGCAGTTCGT CACGGGTGAG
AACATCTCCG AGGCGCTCGC CAACAGCCGC AAGTACGAAG CCCGCGGCTT CCGCTACTCG
TACGACATGC TCGGCGAAGC GGCCACCACC GAAGCCGACG CGCAGCGCTA CTACGCGTCG
TACGAACAGG CGATCCACGC GATCGGCAAG GCTGCCGGCG GCCGTGGCAT CTACGAAGGC
CCGGGCATTT CGATCAAGCT CTCCGCGCTG CACGCACGCT ACTCGCGTTC GCAGCAGGAA
CGCACCATGA GCGAACTGCT GCCGCGCGTG CGCTCGCTGG CAATCCTCGC GCGCCGCTAC
GACATCGGCC TGAACATCGA CGCGGAAGAA GCCGACCGCC TCGAAATCTC GCTCGATCTG
CTCGAAGCGC TGTGCTTCGA TCCGGAGCTG GCCGGCTGGA ACGGCATCGG CTTCGTGGTG
CAGGCGTATC AGAAGCGCTG CCCGTTCGTG ATCGAATACC TGATCGATCT GGCGCGCCGC
AGCCGTCACC GCATCATGGT GCGCCTCGTG AAGGGCGCGT ACTGGGACAC CGAAATCAAG
CGCGCGCAAG TGGACGGCCT CGAAGGCTAT CCGGTCTACA CGCGCAAGAT CTACACAGAC
GTGTCGTATC TCGCCTGCGC GAAGAAACTG CTCAGCGCGC CCGACGCGGT CTACCCGCAA
TTCGCCACGC ACAACGCGCA CACGCTGTCG GCGATCTATC ACCTCGCGGG CAACAACTAT
TACCCCGGCC AGTACGAGTT CCAGTGCCTG CACGGCATGG GCGAACCGCT GTACGAAGAA
GTCACCGGCC GCGACAAGCT GAACCGTCCG TGCCGGGTGT ACGCGCCGGT CGGCACGCAT
GAAACGCTGC TTGCCTATCT CGTGCGCCGT CTGCTGGAAA ACGGCGCGAA CACGTCGTTC
GTGAATCGTA TTGCCGATGA AACCGTCGCG ATCAAGGACC TGATCGCCGA TCCGGTCGAT
GAAGCCTCGA AGATCGTCCC GCTCGGCGCG CCGCACGCGA AGATTCCGCT GCCGCGCAAT
CTGTACGGTT CGGAACGCCT CAACTCGATG GGTCTCGACC TGTCGAACGA GCATCGCCTG
GCGTCGCTGT CGTCGGCGTT GCTGGCGAGC GCGCATCATC CGTGGCGCGC CGCGCCGATG
CTCGAAGACA ACGAGATCGC CGTGGGCCTC GCGCGCGACG TGCGCAATCC GGCCGATCAT
CGCGACCTCG TCGGCACGGT CGTGGAAACG ACGCCGGAGC ACGTGAGCGC CGCTTTGGCG
CACGCGGTGG CCGCCGCGCC GATCTGGCAA GCCACGCCGG TCGATGCGCG CGCCGATTGC
CTCGCGCGTG CCGCCGATCT GCTCGAAGCG CAGATGCATA CGCTGATGGG CCTCGTGGTG
CGTGAAGCCG GCAAGTCGCT GGCCAACGCC GTCGCGGAAA TTCGCGAAGC GATCGACTTC
CTGCGTTACT ACTCCACGCA GATTCGCGAG GAGTTCTCCA ACGACACGCA TCGTCCGCTC
GGCCCGGTGG TCTGTATCAG CCCGTGGAAT TTCCCGCTGG CGATTTTCAT GGGCCAGGTG
GCCGCGGCGC TCGCCGCCGG CAACACCGTG CTCGCGAAGC CGGCCGAACA GACGCCGCTG
ATCGCCGCGC AAGCCGTGCG CATTCTACGC GAAGCCGGCG TGCCGGCGGG CGCGGTGCAA
CTGCTGCCGG GCAACGGTGA AACGGTCGGC GCCGCATTGG TGGCCGATCC GCGCACCCGC
GCGGTGATGT TCACCGGCTC GACCGAAGTC GCACGCCTCA TCAACAAGAC GCTGTCGAGC
CGACTCGATC CGGATGGCAA GCCGATTCCG CTGATCGCCG AAACGGGCGG CCAGAACGCG
ATGATCGTCG ACTCGTCGGC GCTTGCCGAA CAGGTGGTGG CGGACGTGCT GCAATCGTCG
TTCGACTCCG CCGGTCAACG GTGTTCCGCG CTGCGCGTTC TTTGTCTGCA GGACGATGTC
GCGGACCGCA CGCTGGAAAT GCTGACCGGC GCGATGCGCG AACTGGCCGT GGGCAATCCG
GACCGTCTGT CGGTCGACGT CGGCCCGGTG ATCGACCTCG ACGCGAAGCG CGGTATCGAC
GCGCACGTCG CGGCGATGCG CGAGAAGGGC CGCAAGGTCG AGCAGCTGCC GATGCCGGAC
GGTTGCGCGC AAGGCACCTT CGTGCCGCCG ACGTTGATCG AACTCGACAG CATCGACGAA
CTGAAGCGTG AAGTGTTCGG CCCGGTGCTG CACGTGGTGC GCTACCGCCG CAGCCAGCTG
GACAAACTGC TGGAGCAGAT CCGCGCGACC GGCTATGGCC TGACGCTCGG CATCCATACG
CGTATCGACG AAACGATCGC GCATGTGATC AGCCGCGCGC ACGTGGGCAA CATCTACGTG
AACCGGAACG TGATCGGCGC TGTGGTCGGC GTGCAGCCGT TCGGTGGCGA AGGTTTGTCG
GGCACGGGTC CGAAAGCGGG CGGCGCGCTC TATCTGCAGC GGCTCCTCGC CACGCGTCCG
GCCGGTTTGC CGAAGTCGCT TGCGCGGGCT TTGGTCGTGG ATGTTCCGCG CGCGGCCGAA
AACGGCGACA ATCCGTCCGC TGTATTGACG GCTTACCGCG ACTGGCTGAT TACCGAACGC
GAGCCGCAAC TGGCCGCGCG CTGCGACGGC TATCTGTCGC ATGTGCCGGC GGGCGCCACG
GCGGTATTGT CGGGACCGAC CGGCGAGCGC AACACGTACA CGCTGGGCGC GCGCGGCACG
GTGCTGTGTA TCGCGTCGAC GGCGAGCGGT GCGCGCGTGC AGTTTGCCGC GGCGCTGGCT
ACGGGAAATC GCGCGTTGTT CGAAGGCGCG GCTGGGGAAC AATTGGTGTC GCAGTTGCCC
GCCTCGCTGA AGTCGCACGC AAGCGTGAAG AAGAGTGCCG ATACGCCGTT CGACGCCGTG
CTGTTCGAAG GCGATAGCGA CGAACTGCTG GCGCTGGTGA AGGAAGTCGC GAAGCGTCCA
GGCCCGATCG TGTCGGTACA GGGCGTCGCG GCACGCGCGC TGGAAAGCGG CGACGAGGAC
TACGCGCTCG AGCGTCTGTT GACGGAACGC TCGGTCAGCG TCAATACGGC AGCTGCAGGC
GGTAATGCGA ATTTGATGAC GATCGGTTGA
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| Protein sequence | MASTTLGVKV DDLLRSRLKD AATRLERTPH WLIKQAIFAY LEKIEHGQLP PELSGVAGSA
DLTEGAAVEH EEDGGSHPFL DFAQNVQPQS VLRAAITAAY RRPEPECLPF LLGQARLPAN
LAGDVQTMAG KLVETLRTKS KGGGVEGLIH EFSLSSQEGV ALMCLAEALL RIPDRATRDA
LIRDKISKGD WKSHMGQAPS MFVNAATWGL MITGKLVTTN SETSLSSALT RLIGKGGEPL
IRKGVDMAMR LMGEQFVTGE NISEALANSR KYEARGFRYS YDMLGEAATT EADAQRYYAS
YEQAIHAIGK AAGGRGIYEG PGISIKLSAL HARYSRSQQE RTMSELLPRV RSLAILARRY
DIGLNIDAEE ADRLEISLDL LEALCFDPEL AGWNGIGFVV QAYQKRCPFV IEYLIDLARR
SRHRIMVRLV KGAYWDTEIK RAQVDGLEGY PVYTRKIYTD VSYLACAKKL LSAPDAVYPQ
FATHNAHTLS AIYHLAGNNY YPGQYEFQCL HGMGEPLYEE VTGRDKLNRP CRVYAPVGTH
ETLLAYLVRR LLENGANTSF VNRIADETVA IKDLIADPVD EASKIVPLGA PHAKIPLPRN
LYGSERLNSM GLDLSNEHRL ASLSSALLAS AHHPWRAAPM LEDNEIAVGL ARDVRNPADH
RDLVGTVVET TPEHVSAALA HAVAAAPIWQ ATPVDARADC LARAADLLEA QMHTLMGLVV
REAGKSLANA VAEIREAIDF LRYYSTQIRE EFSNDTHRPL GPVVCISPWN FPLAIFMGQV
AAALAAGNTV LAKPAEQTPL IAAQAVRILR EAGVPAGAVQ LLPGNGETVG AALVADPRTR
AVMFTGSTEV ARLINKTLSS RLDPDGKPIP LIAETGGQNA MIVDSSALAE QVVADVLQSS
FDSAGQRCSA LRVLCLQDDV ADRTLEMLTG AMRELAVGNP DRLSVDVGPV IDLDAKRGID
AHVAAMREKG RKVEQLPMPD GCAQGTFVPP TLIELDSIDE LKREVFGPVL HVVRYRRSQL
DKLLEQIRAT GYGLTLGIHT RIDETIAHVI SRAHVGNIYV NRNVIGAVVG VQPFGGEGLS
GTGPKAGGAL YLQRLLATRP AGLPKSLARA LVVDVPRAAE NGDNPSAVLT AYRDWLITER
EPQLAARCDG YLSHVPAGAT AVLSGPTGER NTYTLGARGT VLCIASTASG ARVQFAAALA
TGNRALFEGA AGEQLVSQLP ASLKSHASVK KSADTPFDAV LFEGDSDELL ALVKEVAKRP
GPIVSVQGVA ARALESGDED YALERLLTER SVSVNTAAAG GNANLMTIG
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