| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0016 |
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| Symbol | |
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| ID | 4006411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 4830181 |
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| End bp | 4831896 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637949625 |
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| Product | GMC family oxidoreductase |
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| Protein accession | YP_560963 |
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| Protein GI | 91785757 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTATA CCGACACCAC GCCCGAGACT GCCCGGCGGC TCGAAGGCGA GTTCGACTAC
ATCATCGTGG GCGCGGGGAC GGCGGGATGT GTGCTGGCCA ATCGCCTGAG CGAAGATCCG
GACGTGCAGG TGTTGCTGCT CGAAGCCGGC GGCAAGGACG ATTACCACTG GATTCACGTG
CCGGTCGGCT ACCTCTATTG CATCGGCAAT CCGCGCACGG ACTGGCTTTA CAAAACCCAG
GCCGAAGCCG GGCTCAATGG CCGCGCGCTT TCGTATCCAC GCGGACGCGT ATTGGGCGGC
AGTTCGTCCA TCAACGGCAT GATCTACATG CGTGGTCAGC GCGAAGACTA CGATGAATGG
GCGCGAGTCA CCAACGACTC ATCCTGGTCC TGGAACTCAG TGCTGCCCGT CTTCAGGCGT
AGCGAAGATC ATTACGCCGG CGCGAGCGAA TCTCATGGCG CGGGCGGCCC TTGGCGCGTC
GAGAAACAGC GGTTGAAATG GAAAATTCTC GAAGAGTTTT CGCGTGCGGC GCAAGAGGCC
GGCATTCCCG CAACCGACGA CTTCAACCGT GGCGACAACA CCGGCGTCGG CTACTTCGAC
GTCAATCAGA AACGCGGCAT TCGCTGGAAC GCGTCGAAGG CATTCTTGCG TCCCGCACTC
AAGCGTCCGA ATCTCACGGT CATCACCGGC GCGCACACGC AGCGCGTCGT CTTCGAAGGA
CGCCGTTGCA CGGGCGTCGA ATATCGCGGC AACGACACGG ACTATCTGGC CAAGGCTCGC
TGCGAAGTGA TCCTGAGCTC GGGGGCCGTC AACTCGCCGC AATTGCTCGA ATTGTCCGGC
ATCGGCAATG GCGCGCGTCT GCAGAACCTG GGCATCGAGG TCGTCAACGA TCTGCGTGGC
GTCGGAGAGA ATCTACAAGA CCATTTGCAA TTGCGGATGG CTTATAAGGT CGACGGCGTA
CGCACGCTCA ACACCGCGTC CGCGCATTGG TGGGGCAAGC TGATGATCGG CCTGCAGTAC
GCGCTGTTCC AAAGCGGCCC CATGTCGATG TCGCCGTCGC AACTTGGTGC GTTTGCCAGG
TCCGATCCGA ACGATCGCTC GCTCACGCGG CCCGACCTCG AATATCACGT CCAGCCGCTC
TCGCTCGATC GCTTCGGCGA ACCGCTGCAT CGGTTCAATG CGTTCACCGC GTCGGTGTGC
CAGTTGCGGC CCACTTCGCG CGGCAGCATT CACATCGAAT CGGCCAATGC TTCAGCGCCG
CCGTTGATCG CGCCGAACTA TCTCTCCACC GATTACGACC GGCACGTCGC CGCCAACGCA
CTGCGTCTCA CGCGGCGCAT TGCCGCGGCG CCGGCGCTTG CACGCTATCG TCCGCAAGAG
ATTTTGCCCG GCACTCAGTA CCAGACGGAA GAGGAGTTGC AGCAGGCTGC CGGCGCGGTC
GGCACGACCA TCTTCCATCC GGTCGGCACC TGCCGCATGG GCACGACCGA CGACCCCGGC
GCGGTGGTCG ACAACCGGCT ACGGGTTATC GGTGTTGACG GACTGCGCGT GGTCGATGCA
TCCGTCATGC CGACCATCAC CTCGGGCAAT ACCAATTCGC CCACGCTGAT GATCGCGGAG
CGCGCCAGCG ACATGATCCG CGAGGATCGC CGTGCGCGCG TGGCCGCCAG TTCCGTGGCG
CAAACCAGCC CGGCGCCTTC AGCATTCGCA GTGTGA
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| Protein sequence | MSYTDTTPET ARRLEGEFDY IIVGAGTAGC VLANRLSEDP DVQVLLLEAG GKDDYHWIHV
PVGYLYCIGN PRTDWLYKTQ AEAGLNGRAL SYPRGRVLGG SSSINGMIYM RGQREDYDEW
ARVTNDSSWS WNSVLPVFRR SEDHYAGASE SHGAGGPWRV EKQRLKWKIL EEFSRAAQEA
GIPATDDFNR GDNTGVGYFD VNQKRGIRWN ASKAFLRPAL KRPNLTVITG AHTQRVVFEG
RRCTGVEYRG NDTDYLAKAR CEVILSSGAV NSPQLLELSG IGNGARLQNL GIEVVNDLRG
VGENLQDHLQ LRMAYKVDGV RTLNTASAHW WGKLMIGLQY ALFQSGPMSM SPSQLGAFAR
SDPNDRSLTR PDLEYHVQPL SLDRFGEPLH RFNAFTASVC QLRPTSRGSI HIESANASAP
PLIAPNYLST DYDRHVAANA LRLTRRIAAA PALARYRPQE ILPGTQYQTE EELQQAAGAV
GTTIFHPVGT CRMGTTDDPG AVVDNRLRVI GVDGLRVVDA SVMPTITSGN TNSPTLMIAE
RASDMIREDR RARVAASSVA QTSPAPSAFA V
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