| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5559 |
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| Symbol | |
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| ID | 4016518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007950 |
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| Strand | + |
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| Start bp | 319259 |
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| End bp | 320359 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637945174 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_552306 |
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| Protein GI | 91791356 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACC CTCTTGTGGA AAAAAGAAAA AACCGCCTCC TCTACCTGGC GCCGCTGGCG
CTGGCCGCAC TCCTGGGTGC TTGCGGCAAA GCGCCGGAGG CCCCTGCCGC ATCGACGACG
ATCAGCCGCC CCCTGCCGCT CATGACCGCG TCCGCCGGGG CGCCACTTGA ATACACGGCG
GTCGGCTCGG TGGTGTCGGA CCAGCGCGTC GAGGTCGCCT CGCGGTTGAG CGGCTATATC
CGCGACATCC TGGTGCAGGA GGGCGACCGG GTGCGGCGCG GGCAGTTGCT GGCCCGCCTG
GACGCGTCGG ACGTGGAAGG CGGCATTCGC CAGGGCCAGG CGGCGGGCGG CGCGGCAGAG
GCGGCGCTGC GCGATGCACA GATTGACCTG GAGCGCTTCC AGCGTTTGTT CGAGCGCGGC
AGCGTCTCGG ACAACGAATT GCGCAAGGTG CGCCTGAAGT TCGAGGCCGC GCGCGAGGCC
CGCAACCAGG CGCGCGCCGG TCTGGACACG GCGCTGGCCC AGCGCGCCTA CGCCGAGATC
ATCAGCCCGG TGGACGGCGT GGTGGTGGCG CGCCACAAAC GAACTGGCGA TCTCGCCCTG
CCCGGCATGC CGCTGCTGAC CCTGGAGTCG GGCCGCGGCC TGTTGTTCGA GACCTTCGTG
GCGGAGGGCC AAGTCGCCGC CATCGCGGCC GGCCAGCCGG TGCAAGTCAA CATCGACGGC
GTGCCCGCGC CGCTCAAGGG CACGGTGAGC CGGGTGGTGC GCTCGGGCGA CCCGGTCTCG
CGCAGCTACC AGGTCAAGAT CGCCCTGCCC GAAACGGCGG GGCTGATGCC CGGCATGTTC
GGGCGCGCGG CGTTCGGGCT CGGTGCGAGC CAGGCGCCAT TGGTGCCCAG ACAGGCCTTG
GTCGAGCGCG GCGGGCTCAC CGGCGTTTTT GTGGTGGACG GCGAAGGCCG GGCACGCTTT
CGCTGGCTGC GCATAGCCCG CGAGTGGCCC GATCAGGTCG AGGTGAGTGC TGGTCTGGCC
GCCGATGAGC GCTTCGTGGC AGCGGCTACA CCGGCCCTGC GCGAGGGCGA CCGCGTCACC
GCCGCGAAGG AGGCGCAATG A
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| Protein sequence | MKDPLVEKRK NRLLYLAPLA LAALLGACGK APEAPAASTT ISRPLPLMTA SAGAPLEYTA
VGSVVSDQRV EVASRLSGYI RDILVQEGDR VRRGQLLARL DASDVEGGIR QGQAAGGAAE
AALRDAQIDL ERFQRLFERG SVSDNELRKV RLKFEAAREA RNQARAGLDT ALAQRAYAEI
ISPVDGVVVA RHKRTGDLAL PGMPLLTLES GRGLLFETFV AEGQVAAIAA GQPVQVNIDG
VPAPLKGTVS RVVRSGDPVS RSYQVKIALP ETAGLMPGMF GRAAFGLGAS QAPLVPRQAL
VERGGLTGVF VVDGEGRARF RWLRIAREWP DQVEVSAGLA ADERFVAAAT PALREGDRVT
AAKEAQ
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