Gene Bpro_5441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_5441 
Symbol 
ID4016400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007950 
Strand
Start bp192608 
End bp193354 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content42% 
IMG OID637945061 
Productubiquinone/menaquinone biosynthesis methylase-like protein 
Protein accessionYP_552193 
Protein GI91791243 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0577674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.255989 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCA GTACATCTCT AATCCTTTCC GGCACTTTGA GAATGGCCAA GCAATTGAAA 
CCTCGCGGCT CCATCAAGCA TTTGGATATT GGCTCAGGTC ATGGCGATCT GATTCAATTG
CTAAGGGAAG CTGAATTCAT TAACAAATCG AGCGCGTGTG ACTATACTGA TAGTCTGATG
AAGCTTGACG ACATCAAAGT GACCGAGGTT AATCTAAATG AGCATGGGTT ACCGTACCAA
GACGGAGCCT TTGATTTGGT GACTTGCACC GAGGTAATCG AACATCTAGA GCATTACAGA
AAAACAATAC GCGAAATTTA TCGCGTGTTA GAGCCTGCTG GAGTTGTTGT GATATCAACG
CCTAATGTTT TGAATTTGAA GTCAAGGATT AGATTTTTAA TCTTTGGGTT TTTTAATCTC
TTTGGGCCAC TGCATATAAA AGAGAGTGAA CTCCACACCA CTGGCGGTCA TATAAATCCA
GTTTCTCTTT TTTACTTGAC TCACTCACTA TTAGACGCTG GTTTCGAGAA AATTGCGCTA
ACCATCGACA AGCGTCAAGG CACATCGAAA CTTTGGCTTT TGTTCCTTTA TGTTCCCATC
AAAATTTTCT CCAAGCTTAC AGCCAGAAAA GAAAAGTCGC GCTACAAAAC CATTGACATT
CACAACGAGT ATTTTGTGCG GCAAATAAAT TTCTTGGATG TACTGCTTGG GAGAACAATC
ATTGTGGGTG GCATTAAGCC GGCCTGA
 
Protein sequence
MTLSTSLILS GTLRMAKQLK PRGSIKHLDI GSGHGDLIQL LREAEFINKS SACDYTDSLM 
KLDDIKVTEV NLNEHGLPYQ DGAFDLVTCT EVIEHLEHYR KTIREIYRVL EPAGVVVIST
PNVLNLKSRI RFLIFGFFNL FGPLHIKESE LHTTGGHINP VSLFYLTHSL LDAGFEKIAL
TIDKRQGTSK LWLLFLYVPI KIFSKLTARK EKSRYKTIDI HNEYFVRQIN FLDVLLGRTI
IVGGIKPA