Gene Bpro_5437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_5437 
Symbol 
ID4016396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007950 
Strand
Start bp188601 
End bp189140 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content57% 
IMG OID637945057 
Productlytic transglycosylase, catalytic 
Protein accessionYP_552189 
Protein GI91791239 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.43825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.56373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGG ACCTCGCCCA GCCATTCTCG ACACCGTCCG AACAATGCAT AGTCCCAGCA 
TCGACTTATC ACACGGTCAA CCCGTATGTC CTTCGCTCGA TCCTGACCGT GGAATCGGGA
CTGAAGTCGA GCGCGATTGG GAAAAACCGG AACGGCTCGG TCGACATTGG GATTGGCCAG
ATCAACTCGA TTCACCTGAA AGAGCTCTCG CAATTCGGGA TCGGCCCAAC CCACCTTCAA
GATGCCTGCA TCGGGACCTA TGTTGCGGCC TGGCACCTGA AGAAGGCCAT TGCAGAACGG
GGCAACACTT GGGAAGGTGT GGCGTCGTAT CACAGCCGCA CGCCGTATTT CAACAAGCGG
TATCAGGCCT TGATCGTCAA TGAGATGATC CGAAGTGGTG CCATGCAAGG GCAGCTGCTT
CCAGTGCCTC CACTGAATCC CTTAGACCTC GGTGCTAGCG GTTCCCGTGG GGGGTTGAAA
GCCGCTGCAG CCGGCGACTC CCAAGGATCG AGCGTCATCA TCTTCGATAC CCGCCAATAA
 
Protein sequence
MATDLAQPFS TPSEQCIVPA STYHTVNPYV LRSILTVESG LKSSAIGKNR NGSVDIGIGQ 
INSIHLKELS QFGIGPTHLQ DACIGTYVAA WHLKKAIAER GNTWEGVASY HSRTPYFNKR
YQALIVNEMI RSGAMQGQLL PVPPLNPLDL GASGSRGGLK AAAAGDSQGS SVIIFDTRQ