Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5422 |
Symbol | |
ID | 4016381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007950 |
Strand | - |
Start bp | 173412 |
End bp | 174581 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637945042 |
Product | IS4 family transposase |
Protein accession | YP_552174 |
Protein GI | 91791224 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3385] FOG: Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.219241 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTCG GCAAGACGCT GTTTGCGCAG GTCATGGAGT TTGTTCCATG GACGAGTTTT TCGCGCATCG TGCAGCGCCA CGGTGGAGAC GCCGGGGTAC GCAGGATGAA TTGCGCCGAA CAGTTTCGCG TCATGGCGTT TGCGCAGTTG ACTTGGCGCG AGTCCTTGCG CGACATCGAG GTGACGCTGG GAGCGAACGC CGGCAAGCTC TATTCGATGG GTTTGCGCCA CAGCGTTCAT CGATCCACTT TGGCCGACGC AAACGACTCG CGGGATTGGC GCATTTGGTC CGACCTCGCG GCCTTGCTCA TTCGACGAGC CCGCAAGCTC TACCGCGAAG AGGACTTGGG GCTGGACTTG ACCAATACGG TTTACGCCCT GGATGCAACG ACGATCGATC TGTGTTTGAG CCTGTTCGAC TGGGCCCCGT TTCGCAGCAC CAAGGCAGCC GTGAAGATGC ACACGTTGCT GGACTTGCGC GGCTCCATTC CCGCCTTCAT CCACATCAGC GACGGCAAGA TGGGCGATGT CAACGTGCTG GACTTCCTGC CCGTCGAGGC GGGCGCCTTC TACGTGATGG ATCGTGGCTA TCTGGACTTC GCTCGCCTGT ACAAGATGCA TCAGGCCGGC GCCTTCTTCG TCACACGCGC CAAGCGCGGC ATGAACGCCA GGCGGGTGTA CTCGGCTCAG ACCGACAGGG CGACTGGCGT GATCTGCGAT CAGAGCATTG CGATGAATGG CTTCTACGTC TGCAAGGACT ACCCCGAGCA GTTGCGCCGC ATTCGCTTCA AAGACCCCGA GACGGGCAAG ACGCTGGTGT TCCTGACCAA CAACACGACC CTGCCAGCGC TGACCATCGC CGCTTTGTAC AAGAGCCGCT GGCAGGTGGA GTTGTTCTTC AAGTGGATCA AGCAGCATTT GCGGATCAAG AAATTTCTGG GCACGAGCGA GAACGCCGTG AAAACGCAAA TCTGGTGCGC CGTCTGCACC TACGTGCTCA TCGCCATCGT CAAGAAGGAG CTTCAACTCG ATGCCTCGCT CTACACATTG CTACAGATTC TTTCCGTCTC GATCTTCGAG AAAACTCAGC TCTCATGCGC CCTGCAGCTC GGTTTCCCAA TTCCAGAAAC ACCGCTTGGT GATAACCAGT TGAATCTGTT CAACTTTTAA
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Protein sequence | MNVGKTLFAQ VMEFVPWTSF SRIVQRHGGD AGVRRMNCAE QFRVMAFAQL TWRESLRDIE VTLGANAGKL YSMGLRHSVH RSTLADANDS RDWRIWSDLA ALLIRRARKL YREEDLGLDL TNTVYALDAT TIDLCLSLFD WAPFRSTKAA VKMHTLLDLR GSIPAFIHIS DGKMGDVNVL DFLPVEAGAF YVMDRGYLDF ARLYKMHQAG AFFVTRAKRG MNARRVYSAQ TDRATGVICD QSIAMNGFYV CKDYPEQLRR IRFKDPETGK TLVFLTNNTT LPALTIAALY KSRWQVELFF KWIKQHLRIK KFLGTSENAV KTQIWCAVCT YVLIAIVKKE LQLDASLYTL LQILSVSIFE KTQLSCALQL GFPIPETPLG DNQLNLFNF
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