Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5288 |
Symbol | |
ID | 4016247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007950 |
Strand | + |
Start bp | 41823 |
End bp | 42710 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637944913 |
Product | inner-membrane translocator |
Protein accession | YP_552045 |
Protein GI | 91791095 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.653195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTTTT CACTGTTTGC CGAATTGGCC ATCAACGGCG CACTGTCGGG GCTCATGTAT TCACTGGTGG CCATGGGCAT CGTGATCATC TACAAGTCGT CCTCGGTGCC TAACCTGGCG CAAGGTGCGA TGACCATGCT GGGTGCCTAT GTGGTGCTGG CGATTGCCAA TGGATTGGGC GTGTCGATGT GGGCCGCCAT CCCGCTGGCG ATGGGGACGA TGTTCTTTCT CGGCATGGGC ATCGAACGGG TGGCCTTGCG TCGGCTGGCG GGCCGCCCCA TCATCATGAT ACTGATGATG ACACTGGGGC TGGACATCTT CATACGCGCG ACCGCGATGG CCATCTGGGG TGGCGGCGGC AGTACGCTGT CCATTGGCAT CAGCGACGAA CCGCTGTTCC TGGGGCCCCT GTTGTTGAAT CGGGCTTATG TGGTGGGGGC CGTGGTGGCC GTTGCGCTGT TTTTGGTCCT CATGTTCTTC TTTCAAACGC GCAGAGGCAT TGTCCTGCGC GCCATCTCCG ATGATTACAT CGCATCGTGG TCGATCGGTA TTTCGGTTGA ACGCGGGGTG GCATTTTCAT GGGCCATGTC CTCGGTTCTG GCCACCACAG CCGGTGTGCT GTGGGGCTCG GTTCAAGGGG TCAACCAGGG GCTGGCGCTG CTTTTACTCA AGGGCTTGAC CGTCGCCGTT CTGGGCGGTC TTGACAGCAT CGGCGGGGCC ATTCTGGCCG GCTTGCTGCT GGGACTTCTG GAAGGCGTTG CGTCAGGCTA TCTCGACCCA TTGCTTGGCG GTGGCAGCCG CGACCTGGTG GTTGCCGCAA CGTTGATTCT GACCATCCTG ATTCGGCCGC ACGGCCTGTT CGGGCGCCAC GACATTGAAA GGATCTGA
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Protein sequence | MDFSLFAELA INGALSGLMY SLVAMGIVII YKSSSVPNLA QGAMTMLGAY VVLAIANGLG VSMWAAIPLA MGTMFFLGMG IERVALRRLA GRPIIMILMM TLGLDIFIRA TAMAIWGGGG STLSIGISDE PLFLGPLLLN RAYVVGAVVA VALFLVLMFF FQTRRGIVLR AISDDYIASW SIGISVERGV AFSWAMSSVL ATTAGVLWGS VQGVNQGLAL LLLKGLTVAV LGGLDSIGGA ILAGLLLGLL EGVASGYLDP LLGGGSRDLV VAATLILTIL IRPHGLFGRH DIERI
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