Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5269 |
Symbol | |
ID | 4016221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007950 |
Strand | - |
Start bp | 18015 |
End bp | 18968 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637944894 |
Product | hydroxymethylglutaryl-CoA lyase |
Protein accession | YP_552026 |
Protein GI | 91791076 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAT TACCTACCTC CGTCGAGTTC CATGAGGAAG GGCCGCGCGA GGGCTTCCAG ATGGAGCCGA AAACCTATTC GCTGGCGGAT CGAGCCGCGC TGATTGATGC TTTGGCGGCA TCGGGTCTGA AGCAGATCCA GGTGGCGTCC TTCGTCAGTC CGCGCGCGGT GCCGCAGATG GCAGACACCG CCGAGCTGTT TGCCGCCATC GCCAAGCGTC CCGGCACCCG CTACACGGCG CTCTGGCTCA ACGACAACGG TTTCGATCGG GCGCGCGCCT GCGAACAGGT GGACCTGGAC GGCAAGCTGA TGTTCTACAC CACCGAGCCG TTTTCGCAGC GCAACAACAA CTGCAGCGTG GCCGGGATGC GCGAACGCCA GCTCGGCTGG CTGGACCGCT ACGTCGCCCT GGGCATTCCG GTGGAGAAGG CCTACGTCAT TACAGCCTTT GGCTGCAATC TCGGTGGCGC CGTGCCGCTG TCGATGGTCA CCGATCAGGT GCGCTGGCTG GTCGATGCCT GCGCCGACCG GGGTGTCGCG CTGCCGGCGG TGTACCTGGC CGATACCATG GGCTGGGCAA ATCCCGAGGA GATCAAGCGC CGCATCGGCG CGGTGCGCGA GATCGTTCCG GATGCCAGCA TTGGATTGCA CCTACACGAC ACGCGCGGTG TCGGCGGCGC TAACATCTAT GCCGCCCTGC AGATGGGCGT GCGGCTGTTC GACAGTTCGG TCGCGGGTCT GGGCGGCTGT CCGTTCGCGG GCCACCAGCA CGGCGGCGCA GCCGGCAATA TCTGCACCGA AGACATGGTG TTCATGTGCC AGGAACTGGG GATTGAGACC GGGATCGACC TGGAGGCGCT GATCGAGGCG GCGCGGTTGG CCGAACGCAT TATCGGCCGC ACCCTGTCGG GCCATGTGAT GCACAGCGGC TCGCTCGCTG CAATGAAAGG ATGA
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Protein sequence | MSKLPTSVEF HEEGPREGFQ MEPKTYSLAD RAALIDALAA SGLKQIQVAS FVSPRAVPQM ADTAELFAAI AKRPGTRYTA LWLNDNGFDR ARACEQVDLD GKLMFYTTEP FSQRNNNCSV AGMRERQLGW LDRYVALGIP VEKAYVITAF GCNLGGAVPL SMVTDQVRWL VDACADRGVA LPAVYLADTM GWANPEEIKR RIGAVREIVP DASIGLHLHD TRGVGGANIY AALQMGVRLF DSSVAGLGGC PFAGHQHGGA AGNICTEDMV FMCQELGIET GIDLEALIEA ARLAERIIGR TLSGHVMHSG SLAAMKG
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