Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5204 |
Symbol | |
ID | 4016009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007949 |
Strand | + |
Start bp | 309449 |
End bp | 310297 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637944832 |
Product | integrase catalytic subunit |
Protein accession | YP_551964 |
Protein GI | 91791013 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.184454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.989225 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAGATTG CCCCATCGGG ATACCGGCGC CATGCCGCGC AGCAAAGAGA CCCGGCACTG CGCTGCGCAC GCGTGCAGCG TGATGACACT CTGGCGCCAG AGATTGAGCG GGTCTGGCAA GCCAACATGC GGGTCTACGG TGCTGACAAG GTCTGGAGGC AGTTGAGGCG TGAAGGCATG GCGGTGGCCC GCTGCACGGT GGAGCGGCTC ATGCGCCGCT CGGGTCTGCA GGGTGTGCGC CGAGGCAAGG TCGTACGCAC GACCATCAAC GATGCAGCCG CTGCCCGCCC GCTGGACCGG GTCAATCGGC AATTCAAGGC CGAGCGACCC AACCAGCTGT GGGTGTCGGA CTTCACCTAT GTCTCGACCT GGCAAGGCTG GCTGTACGTG GCCTTCGTCA TCGACGTGTT CGCCCGGCGC ATCGTGGGCT GGCGGGTCAG CAGCTCCATG CGAACGGACT TCGTGCTCGA TGCGCTGGAG CAGGCGCTGT ACGCCCGGCA GCCCGATGCA GACGATGCGC TGATCCATCA CAGCGACAGG GGCTCGCAAT ACGTTTCGAT CCGCTACAGC GAGCGTCTGG CCGAAGCGGG CATCGAGCCG TCTGTGGGCA GCAAAGGCGA CAGCTATGAC AACGCCCTGG CCGAGACGAT CAACGGCTTG TACAAGGCCG AATTGATCCA CCGCCGGGCA CCCTGGAAGA CCAAGGAGGC TGTGGAACTG GCAACCCTGG AGTGGGTGGC ATGGTTCAAC CACCACCGGC TACTGGAGCC CATCGGCTAC ATTCCTCCTG CCGAAGCTGA GGAAAATTAC TATCGGCAAC TCGCCAGTCA GTCCGTCACA CCGGTCTGA
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Protein sequence | MQIAPSGYRR HAAQQRDPAL RCARVQRDDT LAPEIERVWQ ANMRVYGADK VWRQLRREGM AVARCTVERL MRRSGLQGVR RGKVVRTTIN DAAAARPLDR VNRQFKAERP NQLWVSDFTY VSTWQGWLYV AFVIDVFARR IVGWRVSSSM RTDFVLDALE QALYARQPDA DDALIHHSDR GSQYVSIRYS ERLAEAGIEP SVGSKGDSYD NALAETINGL YKAELIHRRA PWKTKEAVEL ATLEWVAWFN HHRLLEPIGY IPPAEAEENY YRQLASQSVT PV
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