Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5150 |
Symbol | |
ID | 4016033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007949 |
Strand | - |
Start bp | 259654 |
End bp | 260847 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637944783 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_551915 |
Protein GI | 91790964 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.156171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGATGA AGAAAAATCT GGTTGCCAGC TTGACGCTGG CCTGCCTCGG CGCCCTCGGC GTGATGAGCG CCGTGCAAGC CGCCGACGAG CCGCTTCGCA TCGGCCTGAT CGCGACCTAT TCGGGTCCCT ATGCCGACTA CGGACGCCAG TTCGACGCCG GCGTGGCGCT CTATCTCAAG GAACACGGCG GTAAAATCGC CGGCCGAACG GTAGAGATCA TCAAAAAGGA TACCGGTGGT CCAGCACCGG ACGCGGCCAA GCGAATCGCG CAGGAGCTGG TGGTGCGCGA TAAGGTGAGC TTCCTCACCG GCCTGGACTT CAGCCCTAAC GCATACGCAG TCGGCGCGAT CGCGACGCAG GCGAAGATTC CCACCATCGT GATGAACGCC GCCTCCTCGG CCATCACGAC CAGCTCGCCC TACGTCGCAC GCCTGTCGTT CACCGTGCAG CAGGTCACGG ACCCGATGGC GCGTTGGATG CTCAAGCAGG GCGTGAAGGA CGCCTACACC GTAGTCGCCG ACTACGCCTC GGGCGTAGAT GCCGAGACCG CTTTCAAGAA AGCCTTCACC ACCGGCGGCG GCAAGGTCTC GGGCGAAGTG CGCACGCCGA TGAACAACCC CGATTTCTCG GCTTACGTCC AGCGCATCAA GGACGCCAAA CCGCAGGCCG TATTCTTCTT CTTTCCCTCC GGGGTGATGC CACCGGCCTT CCTCAAGGTT TGGAAGGAAC GCGGCATGGA GGAGGCTGGC ATAAAGCTTT TCGCGACCGG CGAAGCCACT GACGACAGCT ACCTCGGCAC CACTGGTGAC GTCGCGTTGG GCCTGATCAC CAGCCACCAC TATTCGTATG CCCATCCTTC CCCGAAGAAC CAGAAGTTCG TCAAGGACTT CGCCGCTGAT TTGGGCGCAG CGCTGCGACC AAGCTATTTT TCTGTCACGG CCTACGACGC GATGCAAGCC ATCGAACTCG CTCTCGCCAA GACAAAGGGT GACGTGTCGG GCGACAAGGT CATGGAGGCA CTCAAGGGCC TGAGCTTCGA GAGCCCACGC GGTCCGATCC AGATCGATCC AGTGACGCGC GACATCGTGC AGACGGTCTA CATCCGCAAG ACCGAGCGGG TTAAGGGAGA ACTCGTGAAC GTCGAGTTCG ACAAATTTGA ACGCATCAAG GATCCCGCCA AAGAAGTCAA GTAG
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Protein sequence | MMMKKNLVAS LTLACLGALG VMSAVQAADE PLRIGLIATY SGPYADYGRQ FDAGVALYLK EHGGKIAGRT VEIIKKDTGG PAPDAAKRIA QELVVRDKVS FLTGLDFSPN AYAVGAIATQ AKIPTIVMNA ASSAITTSSP YVARLSFTVQ QVTDPMARWM LKQGVKDAYT VVADYASGVD AETAFKKAFT TGGGKVSGEV RTPMNNPDFS AYVQRIKDAK PQAVFFFFPS GVMPPAFLKV WKERGMEEAG IKLFATGEAT DDSYLGTTGD VALGLITSHH YSYAHPSPKN QKFVKDFAAD LGAALRPSYF SVTAYDAMQA IELALAKTKG DVSGDKVMEA LKGLSFESPR GPIQIDPVTR DIVQTVYIRK TERVKGELVN VEFDKFERIK DPAKEVK
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