Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5115 |
Symbol | |
ID | 4016076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007949 |
Strand | + |
Start bp | 226795 |
End bp | 228264 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637944748 |
Product | succinate semialdehyde dehydrogenase |
Protein accession | YP_551880 |
Protein GI | 91790929 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.891091 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTAA AGCGCCCCTC ACTTTTTCGC CAGCAATGCC ATATCGACGG GCAATGGGTC GATGCCTCGG ACCAGGCAAC CCTGGCTGTC GTCAATCCGG CCAATGATGA AGTCATCGCC TGCGTTCCTC GCCTGACGGA CAAGGACGTG CAAAGCGCCA TCCGCGCGGC AGACAAGGCA CTGCCCGCGT GGCGCGAGAT GAGCGCCAAA GACCGGTCCA AAATATTGCG TCGCTGGTAT GACCTGTGCA TGACGCACCA GGAAGACCTG GCGACCATCC TGACCACCGA GCAGGGCAAA CCACTGAGCG AAGCGCGCGG CGAGATTGCC TACGGCTCCG GATTCATTGA GTGGTTCTCC GAGGAAGCCA AGCGTGTTTA CGGCGACATC ATCCCCGCTC CCACCGCGGA CCGCCGCATC ATCGTGATCA AACAACCCGT CGGTGTCGTG GCCGCGATCA CGCCCTGGAA TTTTCCGAAT GCCATGATCA CGCGCAAGGC TGGCGCCGCG CTTGCCGCAG GATGCACGAT CGTCGTCAAG CCCGCATCGG CAACGCCTTT TTCGGCACTC GCATTGGCCG ATCTGGCCGT CGAGGCTGGC ATTCCGCCGG GCGTGTTCAA CGTTGTGACC GGCCGATCCG ATGTGGTCGG CGGGGCGCTG ACATCCAGCC CAGTGGTCCG AAAGCTCTCG TTTACCGGTT CCACCGAAGT CGGCAAGCAA CTTATGGCGC AGTGCGCTGG CACGGTCAAG AAGGTCTCGA TGGAGCTCGG CGGCAACGCA CCTTTCATCG TGTTCGGCGA CGCCGATCTC GATGCGGCGG TAGCGGGTGT GATGGCCTCG AAGTTCCGCA ATGCAGGACA AACCTGCGTC TGTGCGAACC GCATCTTTGT GCAGGACATG ATCTACGACG TGTTCGCTGC AAAGCTGAAG GTCGCCGTTG AAGCCCAGGT GGTCGGTGAT GGCATGCAGG CGGGCGTCAA TCTAGGCCCG CTGATCGATG CCGCCGCCGT GAACAAGGTC CAGGAGCACA TCAGCGACGC CATTGCCCTG GGGGCCAATG TGCTCACCGG GGGGCAGGCG CACGCGCTGG GTGGTCATTT TTTCCAGCCC ACCATCCTGA TCAACGTGTC CTCCGAGGCA AAGCTGATGA ATGAGGAAAC CTTCGGGCCG GTCGCACCGC TGATCCGCTT TTCTACCGAA GAAGAAGTTG TATCGATGGC CAACGACACA CCCTTCGGAC TCGCCGCCTA CTTCTACACC GGTAGCTATG AACGCGCCTG GCGGGTCTCC GAGGCGCTCG AATGCGGCAT CGTCGGCCTC AATGAAGGAA TCATCTCGAC CGAGCTTGCG CCATTTGGCG GGATCAAGGA GTCGGGCGTC GGTCGCGAGG GCTCCAAATA CGGCATTGAG GATTATGTGG AAGTGAAGTA CATCTGCGCC GGCGGGCTGG GGAAAAAGCG TGCCGCATAG
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Protein sequence | MNLKRPSLFR QQCHIDGQWV DASDQATLAV VNPANDEVIA CVPRLTDKDV QSAIRAADKA LPAWREMSAK DRSKILRRWY DLCMTHQEDL ATILTTEQGK PLSEARGEIA YGSGFIEWFS EEAKRVYGDI IPAPTADRRI IVIKQPVGVV AAITPWNFPN AMITRKAGAA LAAGCTIVVK PASATPFSAL ALADLAVEAG IPPGVFNVVT GRSDVVGGAL TSSPVVRKLS FTGSTEVGKQ LMAQCAGTVK KVSMELGGNA PFIVFGDADL DAAVAGVMAS KFRNAGQTCV CANRIFVQDM IYDVFAAKLK VAVEAQVVGD GMQAGVNLGP LIDAAAVNKV QEHISDAIAL GANVLTGGQA HALGGHFFQP TILINVSSEA KLMNEETFGP VAPLIRFSTE EEVVSMANDT PFGLAAYFYT GSYERAWRVS EALECGIVGL NEGIISTELA PFGGIKESGV GREGSKYGIE DYVEVKYICA GGLGKKRAA
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