Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5027 |
Symbol | |
ID | 4015940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007949 |
Strand | + |
Start bp | 126584 |
End bp | 130126 |
Gene Length | 3543 bp |
Protein Length | 1180 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637944665 |
Product | type II restriction enzyme |
Protein accession | YP_551797 |
Protein GI | 91790846 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.776061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAA CCAAACTCAA GTCCTACGCC CCCCAGGCCC GCAAGGACTT CATCGCCGCC GTCACCGCCC GCGCCAACCT GCTGGGCCTG TCTGAGAAAG GTGGCAAACT CGAAATCGCT CCCAGCCAGA CTCAGGGCGA TGTCACCGTG ATTGCTGGCC AGGCTTGGCC CGTCAAGGTC CACGCCCAGC GCGACCAGCT GATCGAGCGC ATCCAGAAAG ACGGCTTTGC CCAGACGATG GAGGCCATCG CCTACACCTG GTTCAACCGC TTTGCAGCGC TCAGGTACAT GGAACTGCAC GACTATCTGG GCCACGGCCA CCGGGCGCTG TCCAGCAGTG CAGGGGGCCT GCCCGACATC CTCACCCATG CCACCGATCT GGCCAACAGC GATGCCGCCA ACGCCCTCCG AGGCCTGAAC GCAGCCAAAG TCACCGAACT CCAACTCGCC GGCAACCGCG ATGGCGAGTT GTATCGCATG TTGCTGGTGG CCCAGTGCAA CGCCTTGTCC CGCGCCATGC CGTTTCTGTT TGAGCGCATT GACGACGACT CCGAGCTGCT GCTGCCCGAC AACCTGCTGC GCAGCGACTC CGTCATTGCC AAGCTGGTGG AGGAAATTCC GGAAGAAGAC TGGGCCGAGG TGGAAATCAT TGGCTGGCTG TATCAGTTCT ACATCTCCGA GAAGAAGGAC CAGGTCATTG GCAAGGTCGT CAAAAGCGAA GACATCCCCG CCGCCACCCA GCTCTTCACG CCCAACTGGA TCGTGCAATA CCTGGTGCAA AACAGCGTCG GCCGCCTGTG GCTCATGGCA AACCCGCAAA GCACACTGGC CCAGGCGTGG CCGTACTACA TCACCCCCGC CGAGCAAACG CCCCAGGTGC AAGCCCAGCT TGATGCCCTC ATCCAGACCC GCGTGCGGGA GGACGACGAC ACCCTCAACC CCGAAACGAT TACCGTGCTG GATCCTGCCT GTGGCAGCGG CCACATTCTG GTGGTGGCCT ATGACGTGCT CAAGGCCATC TACCTGGAGC GCGGCTACCA ACCCAGAGCC ATCCCGCGCC TGATACTGGA AAAGAACCTT TACGGCCTGG ACATTGACGA CCGCGCTGCC CAAATGGCCG GTTTTGCCTT GCTGATGAAA GCCCGTGCCG ACGACCGCCG CCTGTTCACC GCCACGGACG ATGCCGGCAA CCTGCAGCCG CCCAAGCTCA ATGTGCTGAG CCTGCAAGAG AGCAAAGGCC TGAGCGTGGA CGAGCTCGCC ACCCACCTGG CCCCGTTCAA GGTGCAGCGC GCCACCATCA CCGCGCTGGT GGAAACCTTT GAGCACGCCA AAACCTTTGG CTCGCTGATC CAAATTCCCT ATGCGCTCAA GAAGCATTTA GCGGTGTTGC CGGAGGTGCT GGCCTTGGTG AAACAGAGCG GGGACATGTA TGCCAATGCG GCTTCGGATG ATTTGCTGCC GCTGGTGCAG CAGGCGCAAG TGCTGGCGAG GCAGTTTGAT GCGGTGGTGG CGAATCCGCC TTATATGGGT GGCAGGGGCT TGCCTCGCTC CGTCACAGAC TTTATGTCTG CTGAGTTCCC GTCCAGCAAA CTAGATCTCT ACTCCGTCTT TATGGAACGG GGATTTCAAC TTTGCAAGGC GACCGGAATC AATAGCATGG TTACCATGCA AGGCTGGATG TTTCTTTCTT CCTTTGCCAC TTTTCGGGAG AAGCTACTTG ATGAGCGATC TATTACCAGT CTCATCCAGA TCGGATACAA CAGCTTCCCA GAAATGAATT CGAAGGTTGC CCAAGCCTGC GCCTTTTCAT TTTTGGCGAG CAAAGTGGAC GGCTTGCTTG GCAGGTATGT GGATCTCAAT TCTGCGCCGC AGTCCTCAGA CAAGAGTGAG ATCCTGCTTA ATAGAGATTC TGAAATTGTT TACGATGTAT TTCCCGATGA TTTTAGAAAG ATGCCGGGCA GTCCACTCTC CTACACAATC GCCCCTGGTC TATTGAAGGC ATTTAGCTTC ACGAAATTGG GTGAACTGAC GAAGGGTGAG GGAAAAAATG TTACAGCTGA TAACGAGCGG TTCTTGAGAC TTGTTTGGGA AGTCAGTGCC GAAACTGTTG GAAAAGGGAG GAAGTGGATC ATTTACGCCA AAGGCGGCGA TTATCGAAGG TGGGCCGGAA ATTTAGACTA CGTATGCAAT TGGAGTGAAG CGGCGCGAAA GCACTATCGT TTCAACAATT CATCTCGCAT TATTAGCGAA GAGTTTTGGT ACCTCCCTGG ATTAACCTGG ACAGTAATCG CAACAAGTGG TGTTGGTTTC AGGTATCTGC CGTGTGATAC AACCTTTGAT ACGAAGGGGT TGGCTCTATT TTTTGAGCGA GACGAAAACA TTGTCTCAAT GCTTGCATTG CTAAACTCCA CTGTCGGCCA AAAACTGATC TCTCTCGTGA ATCAGACAAT GTCGATAAAT ACCATCGATA TAAAATCAAT ACCTGTTTGC CCATCGTTCC CTGAAATATC ATCGGAAGCG ACGGAGTTGA TCAATAGTGC GTTGGAAGAC TGGAATTCTG AGGAGCGGTC CTTTGATTTC TCGATGCCGC AGTTATTGAG GCATGGCGAA CAGGAGAAAA GTCTAAGTAG CGCCTTTGCA GCCCACTTCA AGGCTATCGC AAGCAGTATT TCTCGAACAA GGCAGCTTGA GGAAACGATC AACAGCACGC TGATCGAAGC ATATGGACTC CGCGGTGAAC TCTCTCCCGA AGTCCCCGAA TCCCAGATCA CCCTGGCCCG CGCCGACCGC GAGAAGGATT GCCAGCGTCT GATTTCCTAC GCCATCGGCT GCATGATGGG CCGCTATAGT CTGGGCGCGC CAGGCTTGAT TTACGCCCAC GCCGGAAACA TCGGCTTCGA CGCCAGCCGC TATGGCACAT TCCCCGCTGA TGCCGACGGT ATCGTGCCGC TCACTGACGA ACTCTGGTTC GAAGACGATG CCGCCAGCCG CATCCGCGAA TTCCTGCTCG CCGTCTGGGG GCCAGACACC CTGGAAGAAA ACATGGCCTG GCTGGCAGAA AGCCTGGGCT CCAAGGCCAG CGAAACGACG GACGAGACTA TCCGACGCTA CCTGGCCGAC AAGTTCTACA AAGACCACCT GCAAACCTAC AAAAAGCGCC CCATCTACTG GCTCTTCAGC AGCGGCAAAC AAGGCGCCTT CCAGGCCTTG GTCTATCTGC ACCGTTACCA CGAAGGCACG CTAGCCCGCC TGCGCGCCGA ACACGTCGTG CCTCTCACCG GCAAAATCCA GTCCCGCATC GACATGCTGC AAAAAGACGC CACAACCGCC TCCAGCACTG CAGCCCGCAA CAAACTGGCC AAGGAAGTCG ATAAGCTCAA AAAGAAACAC GTCGAGCTCC TGGCCTACGA CGAACAATTG CGCCATCACG CCGACATGCG CATCACACTC GACCTGGATG ACGGTGTGAA GGTGAACTAC GGCAAGTTTG GGAATTTGCT GGCTGAGGTG AAGGCCGTCA CAGGAGGAGC AGGGGATGAC TGA
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Protein sequence | MNKTKLKSYA PQARKDFIAA VTARANLLGL SEKGGKLEIA PSQTQGDVTV IAGQAWPVKV HAQRDQLIER IQKDGFAQTM EAIAYTWFNR FAALRYMELH DYLGHGHRAL SSSAGGLPDI LTHATDLANS DAANALRGLN AAKVTELQLA GNRDGELYRM LLVAQCNALS RAMPFLFERI DDDSELLLPD NLLRSDSVIA KLVEEIPEED WAEVEIIGWL YQFYISEKKD QVIGKVVKSE DIPAATQLFT PNWIVQYLVQ NSVGRLWLMA NPQSTLAQAW PYYITPAEQT PQVQAQLDAL IQTRVREDDD TLNPETITVL DPACGSGHIL VVAYDVLKAI YLERGYQPRA IPRLILEKNL YGLDIDDRAA QMAGFALLMK ARADDRRLFT ATDDAGNLQP PKLNVLSLQE SKGLSVDELA THLAPFKVQR ATITALVETF EHAKTFGSLI QIPYALKKHL AVLPEVLALV KQSGDMYANA ASDDLLPLVQ QAQVLARQFD AVVANPPYMG GRGLPRSVTD FMSAEFPSSK LDLYSVFMER GFQLCKATGI NSMVTMQGWM FLSSFATFRE KLLDERSITS LIQIGYNSFP EMNSKVAQAC AFSFLASKVD GLLGRYVDLN SAPQSSDKSE ILLNRDSEIV YDVFPDDFRK MPGSPLSYTI APGLLKAFSF TKLGELTKGE GKNVTADNER FLRLVWEVSA ETVGKGRKWI IYAKGGDYRR WAGNLDYVCN WSEAARKHYR FNNSSRIISE EFWYLPGLTW TVIATSGVGF RYLPCDTTFD TKGLALFFER DENIVSMLAL LNSTVGQKLI SLVNQTMSIN TIDIKSIPVC PSFPEISSEA TELINSALED WNSEERSFDF SMPQLLRHGE QEKSLSSAFA AHFKAIASSI SRTRQLEETI NSTLIEAYGL RGELSPEVPE SQITLARADR EKDCQRLISY AIGCMMGRYS LGAPGLIYAH AGNIGFDASR YGTFPADADG IVPLTDELWF EDDAASRIRE FLLAVWGPDT LEENMAWLAE SLGSKASETT DETIRRYLAD KFYKDHLQTY KKRPIYWLFS SGKQGAFQAL VYLHRYHEGT LARLRAEHVV PLTGKIQSRI DMLQKDATTA SSTAARNKLA KEVDKLKKKH VELLAYDEQL RHHADMRITL DLDDGVKVNY GKFGNLLAEV KAVTGGAGDD
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