| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4892 |
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| Symbol | |
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| ID | 4012427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 5182894 |
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| End bp | 5183460 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637944534 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_551666 |
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| Protein GI | 91790714 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02943] RNA polymerase sigma-70 factor, TIGR02943 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0623356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGACCT TTGAAGAACA GCTGGTTGAA CACCGCGTCT ACCTGATGCG CTTTGCGCGC
CTGCAGCTGC GCAGTGACGA CTGGGCAGAA GATGCGGTGT CGGAAACATT GCTGGCGGCG
CTGTCCAAGC CGCAGAGTTT TGGCAACCGC TCGCAACTCA AGACCTGGCT GGTCGGCATC
CTCAAGCACA AGGTCATTGA CCTGATTCGT AGCAACGCAC GGCTGGTGGC CATGCCGGAT
GCTCAGACCG ACGAGGACGG CGACGAGCTT GACCGACTGG CATTCAAGGC CGACGGCCAC
TTTGCCGAGA TGCCAAATGA TTGGGGCGAC CCCCACCAGA CCTTGCAGCA GGTGCAGTTC
TTCGAGGTGC TGGACGCCTG CATGGAGCGG CTGCCGCCGG CATTGGGCCG GCTGTTCCTG
ATGCGTGAGT GGCTGGAGCT TTCCTCGCAG GAGGTCTGTA AGGAGTTGTC CCTCACCCCG
ACCAATTTGT ATGTCCAGTT GCACCGGGCC CGGTTGCGCC TGCAGGAATG CCTGAACATT
CACTGGTTTG GCAAACACAG TACCTGA
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| Protein sequence | MPTFEEQLVE HRVYLMRFAR LQLRSDDWAE DAVSETLLAA LSKPQSFGNR SQLKTWLVGI
LKHKVIDLIR SNARLVAMPD AQTDEDGDEL DRLAFKADGH FAEMPNDWGD PHQTLQQVQF
FEVLDACMER LPPALGRLFL MREWLELSSQ EVCKELSLTP TNLYVQLHRA RLRLQECLNI
HWFGKHST
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