Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4882 |
Symbol | |
ID | 4012455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 5171158 |
End bp | 5172126 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637944524 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_551656 |
Protein GI | 91790704 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTCT TCAAGCTCGC CGCCCTTGCC GGCCTGGCCC TCGCCTGCCA GGCCATCCAG GCCCAAACCG TGATCAAGCT CGGCCATGTG CTGGCCAAAG GTTCCCACTA CGACGTGGGC GCCAACGTCT TCTGCGAGGA CATCGAGAAG GCCACGCAGA ACCGCTACAA ATGCCAGCAG TTCCCGGCAG GCGCGCTGGG CGGTGAGCGC GAACAGATCG AAGCGGTGCA GCTCGGCACC CAGGACATGG TGATCACTTC CACGGGCCCT GCGGGAAATT TCGTGCCTGA AATCAAGATC CTGGATATCC CTTTTCTGTT TCGCGACTAC GCGCATGCAC GACACACCCT GGACGGCGCG ACCGGCCAGG AGCTGCTGAC CAAGTTCCCG TCGAAAGGTC TGGTTGCACT CGCCTGGACG GAAAACGGTT TTCGCCACAT GACCAACAGC AAGCGCCCCA TCGTGCAGGC GACGGACGCA TCGGGCCTGA AGATGCGCAC CATGGAAAAC AAGGTCCACA TGGAAGGCTA CCGCACCTTC GGCATCCTGC CTACGCCGAT GGCTTTTCCC GAGGTGTTCG GTGCGCTGCA GCAAGGCGTC GTTGACGGCC AGGAAAACCC GATTCCGGTG ATCCTGGCGT CCAAGTTTTC CCAGGTGCAG AAGCACCTGT CGCTGACGTC CCATGTGTAC TCGCCTGCCC TGATCCTGAC CTCGCCCCGC GTGTGGTCCA GGCTGAGCGA GCAGGACAAG AAAATCTTCA CTGAAGCCGC GAAGAAAAGC GTCGCCGCCC AGCGCAAGAA AGTCAATGAC GACGAGGCCA ACGGTGTCGC CCAGCTCCGC AAGGACGGCA TGCAGGTGAT TGAGCAGGTG CGTGCGGACA GCTTCCGCGA TGCCCTCAAG CCGGCTTATG CGTCATACGC CAAAGAGTTC GGCGCCGAGC GCATCGCCGC CATCCAGGCC GTCAAGTAA
|
Protein sequence | MKLFKLAALA GLALACQAIQ AQTVIKLGHV LAKGSHYDVG ANVFCEDIEK ATQNRYKCQQ FPAGALGGER EQIEAVQLGT QDMVITSTGP AGNFVPEIKI LDIPFLFRDY AHARHTLDGA TGQELLTKFP SKGLVALAWT ENGFRHMTNS KRPIVQATDA SGLKMRTMEN KVHMEGYRTF GILPTPMAFP EVFGALQQGV VDGQENPIPV ILASKFSQVQ KHLSLTSHVY SPALILTSPR VWSRLSEQDK KIFTEAAKKS VAAQRKKVND DEANGVAQLR KDGMQVIEQV RADSFRDALK PAYASYAKEF GAERIAAIQA VK
|
| |