Gene Bpro_4882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4882 
Symbol 
ID4012455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp5171158 
End bp5172126 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content62% 
IMG OID637944524 
ProductTRAP dicarboxylate transporter, DctP subunit 
Protein accessionYP_551656 
Protein GI91790704 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCT TCAAGCTCGC CGCCCTTGCC GGCCTGGCCC TCGCCTGCCA GGCCATCCAG 
GCCCAAACCG TGATCAAGCT CGGCCATGTG CTGGCCAAAG GTTCCCACTA CGACGTGGGC
GCCAACGTCT TCTGCGAGGA CATCGAGAAG GCCACGCAGA ACCGCTACAA ATGCCAGCAG
TTCCCGGCAG GCGCGCTGGG CGGTGAGCGC GAACAGATCG AAGCGGTGCA GCTCGGCACC
CAGGACATGG TGATCACTTC CACGGGCCCT GCGGGAAATT TCGTGCCTGA AATCAAGATC
CTGGATATCC CTTTTCTGTT TCGCGACTAC GCGCATGCAC GACACACCCT GGACGGCGCG
ACCGGCCAGG AGCTGCTGAC CAAGTTCCCG TCGAAAGGTC TGGTTGCACT CGCCTGGACG
GAAAACGGTT TTCGCCACAT GACCAACAGC AAGCGCCCCA TCGTGCAGGC GACGGACGCA
TCGGGCCTGA AGATGCGCAC CATGGAAAAC AAGGTCCACA TGGAAGGCTA CCGCACCTTC
GGCATCCTGC CTACGCCGAT GGCTTTTCCC GAGGTGTTCG GTGCGCTGCA GCAAGGCGTC
GTTGACGGCC AGGAAAACCC GATTCCGGTG ATCCTGGCGT CCAAGTTTTC CCAGGTGCAG
AAGCACCTGT CGCTGACGTC CCATGTGTAC TCGCCTGCCC TGATCCTGAC CTCGCCCCGC
GTGTGGTCCA GGCTGAGCGA GCAGGACAAG AAAATCTTCA CTGAAGCCGC GAAGAAAAGC
GTCGCCGCCC AGCGCAAGAA AGTCAATGAC GACGAGGCCA ACGGTGTCGC CCAGCTCCGC
AAGGACGGCA TGCAGGTGAT TGAGCAGGTG CGTGCGGACA GCTTCCGCGA TGCCCTCAAG
CCGGCTTATG CGTCATACGC CAAAGAGTTC GGCGCCGAGC GCATCGCCGC CATCCAGGCC
GTCAAGTAA
 
Protein sequence
MKLFKLAALA GLALACQAIQ AQTVIKLGHV LAKGSHYDVG ANVFCEDIEK ATQNRYKCQQ 
FPAGALGGER EQIEAVQLGT QDMVITSTGP AGNFVPEIKI LDIPFLFRDY AHARHTLDGA
TGQELLTKFP SKGLVALAWT ENGFRHMTNS KRPIVQATDA SGLKMRTMEN KVHMEGYRTF
GILPTPMAFP EVFGALQQGV VDGQENPIPV ILASKFSQVQ KHLSLTSHVY SPALILTSPR
VWSRLSEQDK KIFTEAAKKS VAAQRKKVND DEANGVAQLR KDGMQVIEQV RADSFRDALK
PAYASYAKEF GAERIAAIQA VK