Gene Bpro_4813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4813 
Symbol 
ID4012503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp5094276 
End bp5094926 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content62% 
IMG OID637944456 
Productisochorismatase hydrolase 
Protein accessionYP_551588 
Protein GI91790636 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAG GCAAACTCGA ACTGCTGACC CCGCAAAACT GCGCGCTGAT CCTGATCGAT 
CACCAGCCGC AGATGACCTT CGGCGTGGCC AATATTGACC GGCAACTGCT GAAGAACAAC
GTCATCGCGC TGGCCAAGAC GGCCCAGGTG TTCAAGGTGC CGACGGTGCT GACGTCAGTG
GAGACCGAGT CATTCTCGGG CAACATCTGG CCCGAGCTGC TCGCCGTGCT GCCCGACAAC
AAGATCTTTG AGCGCACCAG CATGAACACC TGGGACGACG TGGCCGTGAA GGCCGAGCTC
AAGAAGATAG GCCGCAAAAA GCTGGTGTTC GCTGCGCTCT GGACGGAGGT CTGTCTGAAC
TTCCCGGTGC TCGAGGCGAT GGCCGACGGC TACGAGGTCT ACTTCGTGGA AGACGCCTCC
GGCGGCACCT CGGTCGCGGC GCACAACATG TCGGTGCAAC GCATGATCCA GGCCGGCGCC
GTACCGGTCA CCTGGCAGCA GTTCCTGCTG GAAATGCAGC GTGACTGGGC ACGCAAGGAA
ACCTATGCCG GCACGACAGG CATCGTTGTG GAGCACTCCG GCGCCTACGG CGCAGGCATC
GACTACGCGA TCACGCACGT GCACAAGATG CCGGCGCGCA AGCTGGGCTG A
 
Protein sequence
MTQGKLELLT PQNCALILID HQPQMTFGVA NIDRQLLKNN VIALAKTAQV FKVPTVLTSV 
ETESFSGNIW PELLAVLPDN KIFERTSMNT WDDVAVKAEL KKIGRKKLVF AALWTEVCLN
FPVLEAMADG YEVYFVEDAS GGTSVAAHNM SVQRMIQAGA VPVTWQQFLL EMQRDWARKE
TYAGTTGIVV EHSGAYGAGI DYAITHVHKM PARKLG