Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4813 |
Symbol | |
ID | 4012503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 5094276 |
End bp | 5094926 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637944456 |
Product | isochorismatase hydrolase |
Protein accession | YP_551588 |
Protein GI | 91790636 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCAAG GCAAACTCGA ACTGCTGACC CCGCAAAACT GCGCGCTGAT CCTGATCGAT CACCAGCCGC AGATGACCTT CGGCGTGGCC AATATTGACC GGCAACTGCT GAAGAACAAC GTCATCGCGC TGGCCAAGAC GGCCCAGGTG TTCAAGGTGC CGACGGTGCT GACGTCAGTG GAGACCGAGT CATTCTCGGG CAACATCTGG CCCGAGCTGC TCGCCGTGCT GCCCGACAAC AAGATCTTTG AGCGCACCAG CATGAACACC TGGGACGACG TGGCCGTGAA GGCCGAGCTC AAGAAGATAG GCCGCAAAAA GCTGGTGTTC GCTGCGCTCT GGACGGAGGT CTGTCTGAAC TTCCCGGTGC TCGAGGCGAT GGCCGACGGC TACGAGGTCT ACTTCGTGGA AGACGCCTCC GGCGGCACCT CGGTCGCGGC GCACAACATG TCGGTGCAAC GCATGATCCA GGCCGGCGCC GTACCGGTCA CCTGGCAGCA GTTCCTGCTG GAAATGCAGC GTGACTGGGC ACGCAAGGAA ACCTATGCCG GCACGACAGG CATCGTTGTG GAGCACTCCG GCGCCTACGG CGCAGGCATC GACTACGCGA TCACGCACGT GCACAAGATG CCGGCGCGCA AGCTGGGCTG A
|
Protein sequence | MTQGKLELLT PQNCALILID HQPQMTFGVA NIDRQLLKNN VIALAKTAQV FKVPTVLTSV ETESFSGNIW PELLAVLPDN KIFERTSMNT WDDVAVKAEL KKIGRKKLVF AALWTEVCLN FPVLEAMADG YEVYFVEDAS GGTSVAAHNM SVQRMIQAGA VPVTWQQFLL EMQRDWARKE TYAGTTGIVV EHSGAYGAGI DYAITHVHKM PARKLG
|
| |