| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4767 |
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| Symbol | |
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| ID | 4012535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 5052670 |
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| End bp | 5053434 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637944412 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_551544 |
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| Protein GI | 91790592 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.188133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTT CAGCAAATCA GGTTACCCAA GCCACCCAAA CCGCCATCGT CACCGGCGCT
TCGCGCGGCA TCGGCGCTGC CATCGCCCAG CGCCTGGCCA AAGAAGGCTA CGCCGTCGTC
GTCAACTACG CCGGCAAGGC AGACGAAGCC CAGGCCGTGG TGCAATCCAT CACGTCCGCC
GGCGGCCAAG CCGTCGCCGT GCAGGCCGAC GTGTCAAGTT CCGCCGCCGT CAAAGCCCTG
TTTGACGAAA CCATCCAGGC CTTCGGCCGC GTCGACGTGC TCATCAACAA CGCCGGCATC
ATGCCGCCCA CCCTGCCGCA GCTGGCCGAC ACCGACGACG ACACCTTTGA CCGTCTCTTC
GCTGTCAACG TCAAGGGCAC CTTCAACACC CTGCGCGAAG CCGGCGCCCG CCTGCAGCAC
GGCGGGCGCA TCGTTAACTT CTCGACCAGC GTGATCGGCC TGGCGCTGCC CGGCTATGCG
GTGTACGGCG CCACCAAGAG CGCGGTGGAA ACCTTCACCA ACATCATGGC CAAGGAGCTG
CGCGGCAAGA ACATCCGCGT CAACGCCATC GCACCCGGCC CCACCGCCAC CGCGCTTTTC
CTGGACGGCA AGACGCCCGA AACGATTGAG CGCATGTCCA AAATGGCGCC GCTCGAGCGC
CTCGGCACGC CCGAAGACAT CGCCAGCGCC GTCGCTTTCC TGGTCAGCGA AGACGCCGGG
TGGGTCAACG GCCAGACACT GCGCGCCAAC GGTGGCGTGG TCTGA
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| Protein sequence | MTASANQVTQ ATQTAIVTGA SRGIGAAIAQ RLAKEGYAVV VNYAGKADEA QAVVQSITSA
GGQAVAVQAD VSSSAAVKAL FDETIQAFGR VDVLINNAGI MPPTLPQLAD TDDDTFDRLF
AVNVKGTFNT LREAGARLQH GGRIVNFSTS VIGLALPGYA VYGATKSAVE TFTNIMAKEL
RGKNIRVNAI APGPTATALF LDGKTPETIE RMSKMAPLER LGTPEDIASA VAFLVSEDAG
WVNGQTLRAN GGVV
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