| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4694 |
|---|
| Symbol | |
|---|
| ID | 4012618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 4982451 |
|---|
| End bp | 4983500 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637944343 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_551475 |
|---|
| Protein GI | 91790523 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR03261] putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTGG CTCTCCATTT CAAACCCCTC GGCAAGGCAC TCGCCGCAGC AGGCCTGCTG
GCCATCGCCG CGTCTGCCTC GGCGCAAAAA GCCCAGTTGC TGGTCTATAC CGCCCTGGAA
ACCGACCAGC TCAAGGCCTA CCAGGAAGGC TTCAACAAGG CGCATCCCGA CATCGACATC
AAGTGGGTGC GCGACTCGAC CGGCGTGATC ACCGCCAAGC TGCTCGCTGA AAAAGCCAAC
CCCCAGGCCG ACGCGGTGAT GGGCGTGGCG GCTTCCAGCC TGGCCCTGCT GGACAAGCAG
GGCATGCTCG AGCCCTATGC GCCGCTCAAC CTCGACGGCA TCATGAGCCA GTACCGCGAC
AAGAAAAAAG TCCCGGCCTG GTTCGGCATG GACGTGTGGG GCGCCACCAT CTGTTTCAAC
ACGGTCGAAG CCCAGAAAAA GAACCTCCCC AAGCCCGAAA CCTGGCAGGA CCTCACCAAG
CCCATCTACA AGGGCCAGAT CGTCATGCCC AACCCCGCCT CCAGCGGCAC GGGTTATTTC
GACGTGACCG CCTGGCTCAC GCTGTTTGGC GACAAGGACG GCAAGGGCGG TGGCTGGAAA
TACATGGATG GCCTGCATGA AAACATTGCG CAGTACACCC ACTCCGGCTC CAAGCCCTGC
AACATGGCTG CCGCCGGTGA GTTCCTGATG GGCATCTCGT TTGAATACCG CGGCAACGCC
AACAAGGCCA AGGGCGCCCC CATCGACCTG GTCTTCCCGA AAGAGGGCCT GGGCTGGGAC
CTGGAGGCGT TTGCCATCCA CAAGGGCACC AAAAAACTGG ATGCCGCCAA AAAACTGGCC
GACTGGGCTT CCAGCAAGGA CGCCATGATG CTGTACGGCA AGAACTTCGC CATCACGGCG
CAGCCCGGCC TGGCGCCGCC ACTGGCCAAC GTGCCCAAGG ACTATGAAGC GCGCCTCGTG
AAGATGGATT TCACCTGGGC CGCCGACAAC CGCGAACGCA TCCTGAACGA ATGGACCCGG
CGCTATAACA GCAAAACAGA GAAGAAGTGA
|
|---|
| Protein sequence | MQLALHFKPL GKALAAAGLL AIAASASAQK AQLLVYTALE TDQLKAYQEG FNKAHPDIDI
KWVRDSTGVI TAKLLAEKAN PQADAVMGVA ASSLALLDKQ GMLEPYAPLN LDGIMSQYRD
KKKVPAWFGM DVWGATICFN TVEAQKKNLP KPETWQDLTK PIYKGQIVMP NPASSGTGYF
DVTAWLTLFG DKDGKGGGWK YMDGLHENIA QYTHSGSKPC NMAAAGEFLM GISFEYRGNA
NKAKGAPIDL VFPKEGLGWD LEAFAIHKGT KKLDAAKKLA DWASSKDAMM LYGKNFAITA
QPGLAPPLAN VPKDYEARLV KMDFTWAADN RERILNEWTR RYNSKTEKK
|
|---|
| |