| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4677 |
|---|
| Symbol | |
|---|
| ID | 4012640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4965314 |
|---|
| End bp | 4965991 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637944326 |
|---|
| Product | FHA domain-containing protein |
|---|
| Protein accession | YP_551458 |
|---|
| Protein GI | 91790506 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1716] FOG: FHA domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.538689 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAAA TGATCGTCTC TATCGATGGC GTCGTGATCA AGGAAGTCCA GTTGACGAAA
GACCGGACAT CTTTGGGTCG CAGGCCCTAC AACGATATCG TCATTGACAA CCTGGCTGTC
AGCGGTGAGC ACGCGGTTTT GCAAATGTCC GGCAACGAGG TGTACCTCGA AGACCTCAAC
AGCACCAACG GCACCTATGT CAACGGCAAG GCTGTCAAGA AGCGGCTGCT GCAAAACAGT
GATCTGGTCG AAATCGGCAA GTACAAAATC AAGTATGTGA ACGAAGCGGC GGCGCCTGAT
TACGAGAAAA CAATGATCAT CAAGCCGGCA TCCGCAGCGC TCGCGGCACT GGCTGCCGCT
GGTGCCGCCG GTGCTCCTGC GGCGGCCCCC GCGACGGCAG ATGCGGCCAG CGTGGGTCTG
CAAGGGGCGA TCAAGGTCAT GTCCGGCGCG GCCGCCGGCC GGGAAGTGGC CCTGGTCAAA
GTCGTGACCA CCATCGGCAA GCCCGGCGTG GCCGTAGCGG CCATTACCAA AAGGCCTCAG
GGTTTTGTGG TGGCCCATGT GGAGGGCGCC GGCAAGCCCA CGCTCAATGG CGTTCCCATT
GGCGCCGAAC CTGTCAGTCT GAAAAATGGC GACATGCTTG AACTGGCCGG CACGCAGATG
CAGTTCGTGC AGCACTGA
|
|---|
| Protein sequence | MPKMIVSIDG VVIKEVQLTK DRTSLGRRPY NDIVIDNLAV SGEHAVLQMS GNEVYLEDLN
STNGTYVNGK AVKKRLLQNS DLVEIGKYKI KYVNEAAAPD YEKTMIIKPA SAALAALAAA
GAAGAPAAAP ATADAASVGL QGAIKVMSGA AAGREVALVK VVTTIGKPGV AVAAITKRPQ
GFVVAHVEGA GKPTLNGVPI GAEPVSLKNG DMLELAGTQM QFVQH
|
|---|
| |