| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4577 |
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| Symbol | |
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| ID | 4012735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4847436 |
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| End bp | 4848470 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637944226 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_551358 |
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| Protein GI | 91790406 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.883026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.33639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCAC ATTCACTTTC CCGCCGCCGC TTTGTCCAGT CCACCGCCGC CGCCTCCGTG
GCGCTTGCCT CCGGCTTGCC CAGCCTGGCG CGGGCGCAGG CGCCCGTTGC GCTGCGCTTT
TCGTCCTCGC TGGTCGCCGA CCAGAATTCG GCCCACTACG TCTGGTACCA GCGCCTGGAC
GCCAACCTGA AGGCCGCCGT CGGCGACCGG ATCCGGATCG ACTACTTTCC CAACAACCAG
CTCGGCAAGG AAAGCGATGT GGTGCAGCAG GTCAAGGTCG GCTCGATTGA CATGATGGTC
ACCGGCTCGT CGATCTGGGC CACGGCCGCG CCGCAGTTCG GCATGCTGGA CCTCGGTTAC
CTGTTTGACA GCTATGCCCA TGCGGCCAGG GCGCTGGACG GGGGCGTGGG CGCCAAACTC
AATGACATCC TGCAAAAGAG CACGGGCTGC CAGGTCATCA CCTGGGCTTC GCACTTTGGG
GCGCGCAGCG TGTACACCCG GCAGCCGGTC AAGTCGCTCG CCGAGGTGAA AAACGTCAAG
CTGCGCGTGC TGCCCACGCC GGCCTTCATT GAAACCTTCA AGATCATGGG CGCCATCCCG
ACGCCGATCC CGTTCGGTGA GCTCTACATG GCCGCGCAGA CCGGTGTGGT GGACGGCTTC
GAGCATGACG CCGCCACCGT GCTGGCCAGC AAGCTCAATG AAGTTGCCAA AAACTGCTGG
CTGACCGAAC ACCTCTTCAG CCCGCTGGTG GTGGTGATGG GCAAGCGCGG CATGGACAAG
ATCCCGGCAG ACCTGCGCCC GGCCTTCCTG AAGGCCGCGG CGGACGCCAC CGCCCAGCAG
CGCGCCATTG CCACCGACAA GGGCGCGCAG GCTATCGACG CGCTAACGAA GCTGGGCATG
GTGTTCAACC CGATGGCCAA AGCCGAGCGC GATGCCGTGC GCAAGGACAT GGAGGCCCGT
CTCTGGTCCT CCTTTGCCAA GGAGCATCCG GCCACCGCGC CGCTGTTCAC CGCGATCTCC
GCGGCGAGGG TGTGA
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| Protein sequence | MHSHSLSRRR FVQSTAAASV ALASGLPSLA RAQAPVALRF SSSLVADQNS AHYVWYQRLD
ANLKAAVGDR IRIDYFPNNQ LGKESDVVQQ VKVGSIDMMV TGSSIWATAA PQFGMLDLGY
LFDSYAHAAR ALDGGVGAKL NDILQKSTGC QVITWASHFG ARSVYTRQPV KSLAEVKNVK
LRVLPTPAFI ETFKIMGAIP TPIPFGELYM AAQTGVVDGF EHDAATVLAS KLNEVAKNCW
LTEHLFSPLV VVMGKRGMDK IPADLRPAFL KAAADATAQQ RAIATDKGAQ AIDALTKLGM
VFNPMAKAER DAVRKDMEAR LWSSFAKEHP ATAPLFTAIS AARV
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