Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4559 |
Symbol | mnmA |
ID | 4012756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4823227 |
End bp | 4824492 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637944209 |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_551341 |
Protein GI | 91790389 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.888392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.954276 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGACGA AATACCGCAT TGAAGTGGGA ATTGCATCAT CGCGGGATAA TCGCACACCT ATGGACAAGC AACACAGCAA GCAACGGATC GTGGTGGGTT TAAGCGGCGG CGTCGATTCA GCGGTGACGG CTTACCTGCT GAAACAGCAG GGCCATGAGG TCATCGGCAT CTTCATGAAA AACTGGGAAG ATGACGACGA CAGCGAGTAC TGCTCCTCCA ATATCGACTT CGTGGACGCC GCAGCCGTGG CCGATGTGAT CGGCATCGAG ATTGAGCACG TCAACTTCGC GGCCGACTAC AAGGACCGGG TGTTCGCCGA GTTCCTGCGC GAGTACCAGG CCGGCCGCAC GCCCAACCCC GACATCCTGT GCAACGCCGA GATCAAGTTC AAGGCCTTCC TGGACCATGC GATGCGCCTG GGCGCCGAAA AGATCGCCAC GGGGCATTAC GCCAGGGTTC GCAGAAATGA AAGCACCGGA CTGCACGAAC TGCTCAAGGG CCTGGACCCG GCCAAGGACC AGAGCTATTT TCTGCACCGC CTGAACCAGG CCCAACTGTC CAAAACGCTG TTCCCGGTGG GCGAGCTGCA CAAGACCGAA GTGCGGCGCA TTGCCGACGA GATTGGCCTG CCGAACGCGA AGAAAAAAGA TTCGACCGGC ATCTGCTTCA TCGGCGAGCG GCCCTTCCGC GACTTCCTGA ACCGCTACAT CGCCAAGGCG CCCGGCCCGA TTAAAAATGA CCGGGGCCGC GTGCTGGGCA AGCATGTGGG CCTGTCTTTT TACACGCTGG GCCAGCGCCA GGGCCTGGGC ATAGGCGGCG TGAAGGCCCG AGGCGCAGAA CTCAAGGCCG CCCAGGCGCG CGGGCAGCGC GGCGTCGGTG AACATGAGCC CTGGTTTGTG GCGCGCAAGG ACCTGGACAC CAACACCTTG TGGGTGGTAC AGGGCCACGA TCATCCGTGG CTGCAGTCCA CGGTGCTCAG CGCGCAGGAC TGCAGCTGGG TCGCGGGTAC CGCGCCGGCC GCGGGCTTGA TGGCCGCCAA GACCCGCTAC CGGCAGGTGG ATGCCACCTG CGAGCTGCGC AGCGCGACGA CCGCGAATTG CGAACTGGTA TTTGCCGAGC CCCAGTGGGC CGTGACGCCC GGGCAGTCGG CCGTTCTGTA CCAGGGCGAT GTCTGCCTGG GTGGCGGGGT GATTGCGGCC AGCAACGTGC CCAATACCCT GCCGACGGTG TCGACCCGGT CAACGCCGGA ACTATTGGTC AAATAA
|
Protein sequence | MRTKYRIEVG IASSRDNRTP MDKQHSKQRI VVGLSGGVDS AVTAYLLKQQ GHEVIGIFMK NWEDDDDSEY CSSNIDFVDA AAVADVIGIE IEHVNFAADY KDRVFAEFLR EYQAGRTPNP DILCNAEIKF KAFLDHAMRL GAEKIATGHY ARVRRNESTG LHELLKGLDP AKDQSYFLHR LNQAQLSKTL FPVGELHKTE VRRIADEIGL PNAKKKDSTG ICFIGERPFR DFLNRYIAKA PGPIKNDRGR VLGKHVGLSF YTLGQRQGLG IGGVKARGAE LKAAQARGQR GVGEHEPWFV ARKDLDTNTL WVVQGHDHPW LQSTVLSAQD CSWVAGTAPA AGLMAAKTRY RQVDATCELR SATTANCELV FAEPQWAVTP GQSAVLYQGD VCLGGGVIAA SNVPNTLPTV STRSTPELLV K
|
| |