Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4411 |
Symbol | |
ID | 4012904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4657420 |
End bp | 4658331 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637944059 |
Product | LysR family transcriptional regulator |
Protein accession | YP_551196 |
Protein GI | 91790244 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.753366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.429795 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAACC TCTCGCAGGT TGAAGCCTTT CGTGCGGTTG TGCTCTCCGG CTCCACCACG GCAGCGGCGC GCGTTCTTCA CACTTCGCAG CCCAATGTCA GCCGGTTGAT ATCTCAGCTT GAAAAAGCCA TCGGCCTCCT CCTTTTCGAA AGATCCCCAG GCAAGTTGAC CCCAACGGAG GAGGGGCTCA CTTTTTTCAC CGAGGTTCAA CGCAGCTTCC TGGGTTTGGA GAGGCTAGAT GAAACTGCAG ACAAAATTAG GCGTTTTGGC ACCGGCGAAC TGAGAATTGC CGCGGTGTCC ACGATTGCAT TCGGACTTCT GCCGCGCGCA ATAAAGAGGT TCGCCCAAGA TCATCCCGAA GTCGGCATCT CCATTCACAT GGGCCACTCG TCGGTCATTT CGCAGTGGGT GGATTCGCAT TTCTGTGATT TGGGCATCGT TTCGCAGCTG TCACGCCAGG ACATTTCAAC TGAGCCGGAC GTTTTATACC GGATAGATGG CGTTTGCCTG ATGCCGGAAA ACCACCGACT GGCGGAGAAG AAGCGTCTCA CTCCGATGGA TCTTGAAGGC GAGACCTTCA TCTCGTCAGC CAAGCCTGAC GAACTGCGTA AAAGCGTCGA CCGAATTTTC GATCAAGCGG GGGTGAAGCG AATAATAAAT ATCGAAACGT CCTACAGCTC CATCATCTGG TCGCTCGTGG GGCTGGGCAT GGGCATAAGT ATCGTCAATC CGCTTGCCGT ACAGGATTAC CGGTCGGCGC CTGTCGTGAC ACGGCCTTTT GATCCCGCAC TGCCGTATGA AGGCATTCTG ATCATTCCGA AAGGTCGACC GGCCAACCGC CTGGTCGCGA AATTTTCAGA AGTATTACGT CAGATCGCAC GCGAAGAGTG CGAAGCACTA CAAGGAAAAT GA
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Protein sequence | MMNLSQVEAF RAVVLSGSTT AAARVLHTSQ PNVSRLISQL EKAIGLLLFE RSPGKLTPTE EGLTFFTEVQ RSFLGLERLD ETADKIRRFG TGELRIAAVS TIAFGLLPRA IKRFAQDHPE VGISIHMGHS SVISQWVDSH FCDLGIVSQL SRQDISTEPD VLYRIDGVCL MPENHRLAEK KRLTPMDLEG ETFISSAKPD ELRKSVDRIF DQAGVKRIIN IETSYSSIIW SLVGLGMGIS IVNPLAVQDY RSAPVVTRPF DPALPYEGIL IIPKGRPANR LVAKFSEVLR QIAREECEAL QGK
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