| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4406 |
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| Symbol | |
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| ID | 4012938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4649496 |
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| End bp | 4651121 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637944054 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_551191 |
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| Protein GI | 91790239 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0490152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGTC GTGATTTCGT CAAAGGCGCA GCAGCTCTTA CTGCAACCGC CGCCGCTGGC
ATCGGGCAAG CGCAACAAGC CGGGGCGCCA GTTGCGAAGC GCTCAATTCT GACAGCTACG
GCGCAGTTCG ACCCGGCCCG CCCGGAGATT GCCCGGGTTG TCGCACAGTC CTGCAAGTCG
CTCGGGTGGG AGGTTGAAGC CAATCCCATC GACTACAACC AGGGCATCAC GAAAGTGATC
AACGAGCATG ACTTCGAGAT GTTCCTGGTC TTTCTTCCGG GTACGGCCAT CCGCATCGAC
CCCGACTTCT TCATTCGCAG CATTCACCAC TCCACAGAGC ATAAGCGCGG CGGCTTCAAC
TGGGCGGGCT ACAAGAACGA CCGTGTAGAC GCGCTGGCAA CCGTGCAGAG CCGCTTGATG
AAGATCGACG ACCGTAGGAA GCCGGTGCTC GAAGCGCAGG AAACCATCTT CCAGGACCAG
CCTGGAACCG TGCTGGCCTA TACGCAGATG ACGATGGCTC ATCGTTCGGA CAAGCTCAAG
GGCCTGGTGC CGCAGCTCGG CGAGGGAATC GGCGGCTTTT GGTCTGACGT CAACATGGAA
GTGGCGGGCG ACGGATTCTC GCGCACCGGT TCGAATGCGG ACGTCAAGCA TCTGAATCCA
GTTGCGGTCA ATGACTCCAT GGAATTCATG GAGCTTTCCA TGATCTACGA CCGACTTTTC
CGCCTTGGGC CCGACGGCAA ACCTGTACCT TGGGCAGCCT CCGGAATGAA GTTGGTGGAT
GACAAAACCA TCGATCTGAC GATCCGCTCG GGTATGCGCT GGCATGACGG TAAGCCAGTG
ACGGCCGAGG ATGTCAAGTT CACCTTCGAC TATCACAAGA AGTGGAAGGC GCCATTTTTC
CTTGCCGCGC TCAATAATGT CGTCGCGGTG GAGCTCCCGA GCCCCAATAC GGTGCGCATC
CGACTCGAAA ATCCATCGGC TCCCTTTGTC TCCAACGTGA TGGCGACGAT GTTTCTTCTC
CCCAAACACA TTTGGGAAGG CATCCCGGAG AAGGTCGGCA TTGACGATCC GCTCAAATTC
CCCAACGACA AGCCGGTCGG TAGCGGACCG TTCAAGTTCG ACTACTGGCG GCGCGGTTCG
GAACTCAAGG TCACCGCGTT CCGCGAGCAC TTCAACCCAC CCAAGTGCGC AGGCATCATC
CGCATTACTT ACGGCAGCCA TGACGCGTTG GCCGCCGCCA TCGAGAAGGG GGAATGCGAC
CGCTCACGCT ACATCTTGTC GCCAGCCCTT GTCGATCGTA TAAAGAACGT GAAGAACGTA
GTGGCCAAGG GCTATCCCAG CCACGGCCTC TATCACCTTG CGTACAACAA CAAGATCAAG
CCTTTCGACG ATCCCGCCTT CCGCCAGGCG CTCAACCATG TGATGCCGCG CAAGATGATC
TCGGAGCTGA TCCTGCTCGG GTACGCCGAT CCCGGCGCAT CAATTATTTC GCCCATCAGC
ACGTTTTGGC ACAACCCGGC TGTCAAGGTT CCGGCTGAAG ACGTGAAGAA GGCGCGCGAC
ATTCTTGCGA AGGCCGGTTA CGGATGGGAC GCGCAAGGCA AATTGCTCTC TCCCCGCGGC
AAATGA
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| Protein sequence | MDRRDFVKGA AALTATAAAG IGQAQQAGAP VAKRSILTAT AQFDPARPEI ARVVAQSCKS
LGWEVEANPI DYNQGITKVI NEHDFEMFLV FLPGTAIRID PDFFIRSIHH STEHKRGGFN
WAGYKNDRVD ALATVQSRLM KIDDRRKPVL EAQETIFQDQ PGTVLAYTQM TMAHRSDKLK
GLVPQLGEGI GGFWSDVNME VAGDGFSRTG SNADVKHLNP VAVNDSMEFM ELSMIYDRLF
RLGPDGKPVP WAASGMKLVD DKTIDLTIRS GMRWHDGKPV TAEDVKFTFD YHKKWKAPFF
LAALNNVVAV ELPSPNTVRI RLENPSAPFV SNVMATMFLL PKHIWEGIPE KVGIDDPLKF
PNDKPVGSGP FKFDYWRRGS ELKVTAFREH FNPPKCAGII RITYGSHDAL AAAIEKGECD
RSRYILSPAL VDRIKNVKNV VAKGYPSHGL YHLAYNNKIK PFDDPAFRQA LNHVMPRKMI
SELILLGYAD PGASIISPIS TFWHNPAVKV PAEDVKKARD ILAKAGYGWD AQGKLLSPRG
K
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