Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4390 |
Symbol | |
ID | 4012922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4632808 |
End bp | 4634667 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637944039 |
Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
Protein accession | YP_551176 |
Protein GI | 91790224 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.394233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCTG ACCTCGTCGC CCGCGTACAG AACCTGAGCG TGGCCTTCTG CGGCGACGTC GGCGCCCCCA TGGCGGTGCG CGATGTCTCT TTCGAGGTGG CGCGTGGAAA GACGCTGGCC ATCGTTGGCG AGTCGGGCTC GGGCAAGTCG GTGACTTCGC TGGCCATCAT GCGTCTTGTA GAACTGGGCG GCGGCCGCAT CGCCTCCGGG CAAATGCAGC TGCGCACCCG CCATCATGGG GTGGTCGATC TTATGGAAGC GCCCGAATCT CAACTCCGTC GCCTGCGGGG CGCCGACATG GCCATGATCT TCCAGGAGCC CATGACCTCC TTGAACCCGG TTTTCAAGGT CGGCGACCAA ATTCTGGAGG CCATCCGCCT GCACCAACCC GGTGACCGTG CGGCCACACT TGCACGCGCG CTGCGCATGC TGGATCTCGT GAGAATCCCT GATGCGAAGC AGGTGATGGG GCGCTACCCG CACCAGCTTT CCGGCGGCAT GCGCCAGCGA ATCATGATCG CGATGGCATT GGCCTGTGAA CCCACTTTGC TCATTGCCGA CGAACCTACC ACGGCGCTGG ACGTGACCGT GCAGTCGCAA ATCCTGCAGA TCATTCGCGG GCTGCAGGAC GACCTGGACA TGGGCGTGGT TTTCATCACT CACGACATGG GTGTCGTGGC TGAGATTGCC GACGAGGTGA TGGTCATGCG CAACGGCGAG ACAGTCGAAC GCGGTTCGGT CGGGCGCATA TTTGCGCGGC CCCAGCATCC ATACACGCGA AGTCTGCTGG CCGCGGTGCC CAGGCTAGGA GCTATGCAGG GTACCGATTT CCCGGCGAAG TTCCCCTTGG TCGAGCCTGG CACGGGCGAG GTGGTTCAGG CGGTTGCTCC GTCAGGATCG CCGCTGGATG CACCCACACC AGACTACAAC CTCCCACCCT TGCTGCGTGT GCGTAATCTG GTGACCCGTT ACGACTTGCG CGGCGGCATT CTCGGCCGCG TGCAGCGCCG TGTCCATGCG GTAGAGGATG TGAGCTTTGA TCTCTTCGCT GGAGAAACAC TTGCATTGGT CGGTGAATCA GGCTGCGGAA AATCGACCAC AGCCCGTGCG GTAGCGCGCC TGCTGCACAC ACAAGGCGGG CAGATCGAGT TCAACGGGCA GTCCATCGGC ACCATGACCG GCAGCAGGCT CAAGGGCCTG CGCCGAGAGG TACAGATGGT GTTTCAGGAC CCCTACGCAT CGCTCGATCC GCGCCGCACC ATCGAAGACT CACTGCTTGA ACCGCTTAAG GTACACAACA TTGCATACGG TGAGGAGGCG CGCCGCCGGG CTGGCGAGCT GTTGTGCAAG GTTGGCTTGC TACCGCAGCA TGCGCACCGC TACCCACACG AGTTCTCGGG CGGGCAGCGA CAACGCATCT GTATTGCGCG AGCGTTGGCC CTTTCGCCAC GCCTGATTGT GGCCGATGAG TCGGTTTCCG CACTTGACGT ATCCATTCAA GCTCAGGTCA TCAACCTCAT GCAGGATCTG CAGCGCGAAC TGGGAATTGC CTTTCTTTTT ATCTCACACG ACCTGGCTGT GGTTGAGCGC GTGAGCCACC GGGTGGCTGT TATGTATCTT GGGCGCATCG TGGAGATTGG CACCCGTCGC CAGATCTTTG AAAACCCTCG CCATCCCTAC ACCCGCAAGT TGCTGTCCGC CGTTCCGGTG GCAGACCCGC AACGCCGCAA CCTGCGCCAC ATGATGGCCG GTGAAATTCC AAGTCCCATA CATGGCCTGC ACTATGCGCC GCCTGAGCTA AGGCTTGACG AGATAGCACC CGGTCACTTT GTGGTCCACG ACGCGTTGAT GGCGGCTTGA
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Protein sequence | MNADLVARVQ NLSVAFCGDV GAPMAVRDVS FEVARGKTLA IVGESGSGKS VTSLAIMRLV ELGGGRIASG QMQLRTRHHG VVDLMEAPES QLRRLRGADM AMIFQEPMTS LNPVFKVGDQ ILEAIRLHQP GDRAATLARA LRMLDLVRIP DAKQVMGRYP HQLSGGMRQR IMIAMALACE PTLLIADEPT TALDVTVQSQ ILQIIRGLQD DLDMGVVFIT HDMGVVAEIA DEVMVMRNGE TVERGSVGRI FARPQHPYTR SLLAAVPRLG AMQGTDFPAK FPLVEPGTGE VVQAVAPSGS PLDAPTPDYN LPPLLRVRNL VTRYDLRGGI LGRVQRRVHA VEDVSFDLFA GETLALVGES GCGKSTTARA VARLLHTQGG QIEFNGQSIG TMTGSRLKGL RREVQMVFQD PYASLDPRRT IEDSLLEPLK VHNIAYGEEA RRRAGELLCK VGLLPQHAHR YPHEFSGGQR QRICIARALA LSPRLIVADE SVSALDVSIQ AQVINLMQDL QRELGIAFLF ISHDLAVVER VSHRVAVMYL GRIVEIGTRR QIFENPRHPY TRKLLSAVPV ADPQRRNLRH MMAGEIPSPI HGLHYAPPEL RLDEIAPGHF VVHDALMAA
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