Gene Bpro_4390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4390 
Symbol 
ID4012922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4632808 
End bp4634667 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content62% 
IMG OID637944039 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like 
Protein accessionYP_551176 
Protein GI91790224 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.394233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTG ACCTCGTCGC CCGCGTACAG AACCTGAGCG TGGCCTTCTG CGGCGACGTC 
GGCGCCCCCA TGGCGGTGCG CGATGTCTCT TTCGAGGTGG CGCGTGGAAA GACGCTGGCC
ATCGTTGGCG AGTCGGGCTC GGGCAAGTCG GTGACTTCGC TGGCCATCAT GCGTCTTGTA
GAACTGGGCG GCGGCCGCAT CGCCTCCGGG CAAATGCAGC TGCGCACCCG CCATCATGGG
GTGGTCGATC TTATGGAAGC GCCCGAATCT CAACTCCGTC GCCTGCGGGG CGCCGACATG
GCCATGATCT TCCAGGAGCC CATGACCTCC TTGAACCCGG TTTTCAAGGT CGGCGACCAA
ATTCTGGAGG CCATCCGCCT GCACCAACCC GGTGACCGTG CGGCCACACT TGCACGCGCG
CTGCGCATGC TGGATCTCGT GAGAATCCCT GATGCGAAGC AGGTGATGGG GCGCTACCCG
CACCAGCTTT CCGGCGGCAT GCGCCAGCGA ATCATGATCG CGATGGCATT GGCCTGTGAA
CCCACTTTGC TCATTGCCGA CGAACCTACC ACGGCGCTGG ACGTGACCGT GCAGTCGCAA
ATCCTGCAGA TCATTCGCGG GCTGCAGGAC GACCTGGACA TGGGCGTGGT TTTCATCACT
CACGACATGG GTGTCGTGGC TGAGATTGCC GACGAGGTGA TGGTCATGCG CAACGGCGAG
ACAGTCGAAC GCGGTTCGGT CGGGCGCATA TTTGCGCGGC CCCAGCATCC ATACACGCGA
AGTCTGCTGG CCGCGGTGCC CAGGCTAGGA GCTATGCAGG GTACCGATTT CCCGGCGAAG
TTCCCCTTGG TCGAGCCTGG CACGGGCGAG GTGGTTCAGG CGGTTGCTCC GTCAGGATCG
CCGCTGGATG CACCCACACC AGACTACAAC CTCCCACCCT TGCTGCGTGT GCGTAATCTG
GTGACCCGTT ACGACTTGCG CGGCGGCATT CTCGGCCGCG TGCAGCGCCG TGTCCATGCG
GTAGAGGATG TGAGCTTTGA TCTCTTCGCT GGAGAAACAC TTGCATTGGT CGGTGAATCA
GGCTGCGGAA AATCGACCAC AGCCCGTGCG GTAGCGCGCC TGCTGCACAC ACAAGGCGGG
CAGATCGAGT TCAACGGGCA GTCCATCGGC ACCATGACCG GCAGCAGGCT CAAGGGCCTG
CGCCGAGAGG TACAGATGGT GTTTCAGGAC CCCTACGCAT CGCTCGATCC GCGCCGCACC
ATCGAAGACT CACTGCTTGA ACCGCTTAAG GTACACAACA TTGCATACGG TGAGGAGGCG
CGCCGCCGGG CTGGCGAGCT GTTGTGCAAG GTTGGCTTGC TACCGCAGCA TGCGCACCGC
TACCCACACG AGTTCTCGGG CGGGCAGCGA CAACGCATCT GTATTGCGCG AGCGTTGGCC
CTTTCGCCAC GCCTGATTGT GGCCGATGAG TCGGTTTCCG CACTTGACGT ATCCATTCAA
GCTCAGGTCA TCAACCTCAT GCAGGATCTG CAGCGCGAAC TGGGAATTGC CTTTCTTTTT
ATCTCACACG ACCTGGCTGT GGTTGAGCGC GTGAGCCACC GGGTGGCTGT TATGTATCTT
GGGCGCATCG TGGAGATTGG CACCCGTCGC CAGATCTTTG AAAACCCTCG CCATCCCTAC
ACCCGCAAGT TGCTGTCCGC CGTTCCGGTG GCAGACCCGC AACGCCGCAA CCTGCGCCAC
ATGATGGCCG GTGAAATTCC AAGTCCCATA CATGGCCTGC ACTATGCGCC GCCTGAGCTA
AGGCTTGACG AGATAGCACC CGGTCACTTT GTGGTCCACG ACGCGTTGAT GGCGGCTTGA
 
Protein sequence
MNADLVARVQ NLSVAFCGDV GAPMAVRDVS FEVARGKTLA IVGESGSGKS VTSLAIMRLV 
ELGGGRIASG QMQLRTRHHG VVDLMEAPES QLRRLRGADM AMIFQEPMTS LNPVFKVGDQ
ILEAIRLHQP GDRAATLARA LRMLDLVRIP DAKQVMGRYP HQLSGGMRQR IMIAMALACE
PTLLIADEPT TALDVTVQSQ ILQIIRGLQD DLDMGVVFIT HDMGVVAEIA DEVMVMRNGE
TVERGSVGRI FARPQHPYTR SLLAAVPRLG AMQGTDFPAK FPLVEPGTGE VVQAVAPSGS
PLDAPTPDYN LPPLLRVRNL VTRYDLRGGI LGRVQRRVHA VEDVSFDLFA GETLALVGES
GCGKSTTARA VARLLHTQGG QIEFNGQSIG TMTGSRLKGL RREVQMVFQD PYASLDPRRT
IEDSLLEPLK VHNIAYGEEA RRRAGELLCK VGLLPQHAHR YPHEFSGGQR QRICIARALA
LSPRLIVADE SVSALDVSIQ AQVINLMQDL QRELGIAFLF ISHDLAVVER VSHRVAVMYL
GRIVEIGTRR QIFENPRHPY TRKLLSAVPV ADPQRRNLRH MMAGEIPSPI HGLHYAPPEL
RLDEIAPGHF VVHDALMAA